Brassica napus (rape): 106421606
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Entry
106421606 CDS
T04128
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106421606
03036 Chromosome and associated proteins [BR:
bna03036
]
106421606
Transcription factors [BR:
bna03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
106421606
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
106421606
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
HMG_box_5
YL1
Motif
Other DBs
NCBI-GeneID:
106421606
NCBI-ProteinID:
XP_013717889
UniProt:
A0A078EWY5
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Position
C2:51819600..51823245
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AA seq
646 aa
AA seq
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MTDVHSFNNISLSGRGGSNPGLLKINSGGIQWKKQGGGKAVEVDKSDIVGVSWMKVPRTN
QLGVKTKDGLYYKFIGFRDQDVASLTIFFQSAFGKTPEEKQLSVSGRNWGEVDLNGNNLT
FLVGGKQAFEVSLADVSQTQLQGKNDVLLEFHVDDTAGANEKDSLMEISFHIPNTNTQFV
GDETRPPAQVFHDNILKVADVGAGVEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDSVVESELSIS
DDLMNTRFKDKLERSYKGFIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDG
VLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLSIRLKTDHEHLFRNIQ
RNEYHNLYSFISSKGLKIMNLGGAGTAEGVAAVLQDNDDDDAVDPHLERIRNQAADESDE
EDEDFVGAEDDDGGSPTDDSGEDDDSDASDADGGEKEKSVKKEPKKEASSSKGLPLKKKA
LATEEGSSKKKTQKKKKDPNAPKKAMSGFMYFSQMERDNIKKSNPGIGFGDIGKVLGDKW
RQMSAEEKEPYEAKAQVDKKRYKDEISDYKNPQPMLVDSGNDSDSN
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgttcattccttcaacaacatctccctcagcggccgcggcggatcgaaccct
ggactccttaagatcaactcaggagggatccaatggaagaagcaaggcggcggcaaagct
gtggaggtcgacaaatcggacatcgtgggcgtgagctggatgaaggttccgaggactaac
cagcttggtgtcaaaaccaaagacgggttgtactataagttcattggctttcgtgatcag
gatgttgcgagcttgaccatctttttccaaagtgcgtttgggaaaacgcctgaagagaag
cagctctctgttagtggtcgcaattggggtgaggtggacttgaatgggaataatttaaca
tttttggttggtggaaagcaagcttttgaagtgtctctggctgatgtgtcacagactcag
ctccaagggaaaaatgacgtcttgttggagtttcatgttgatgacactgctggtgccaat
gagaaagactcgttgatggagataagttttcatattcctaataccaacacccagtttgtt
ggtgatgaaactcgtccccctgctcaagttttccatgacaatatcttgaaagtggctgat
gttggtgctggtgttgaggaggccgtcgtcacatttgagggtattgcaatcctcactccc
aggggtcggtacaatgtggagcttcacctttctttcttgcgtctgcaaggacaagccaat
gactttaaaattcagtacagtagtgttgtccgcttgtttttgcttccaaagtcaaaccag
ccacacacgtttgttgttatctctctagacccaccaatccggaaaggtcagactctgtac
ccccatattgtgatgcagtttgagacagactctgtcgtcgaaagtgaactctcaattagt
gatgatcttatgaatacaaggttcaaggacaagttggaacgatcatataagggtttcata
catgaagtgttcaccaccgtgttgcgttggctgtctggtgcaaagatcactaaaccaggg
aagttccgcagttcccaagatgggtttgcagtgaaatcatctcttaaggcagaagatggt
gttctctatcccctcgagaagggctttttcttcttacctaaacctccaacgcttatactt
catgatgagattgactatgtggagtttgaaaggcatgctgctggtggtgctaacatgcat
tacttcgatctctccataagactgaaaactgatcatgaacatctcttccggaatattcag
aggaatgagtatcacaatctctattccttcataagctctaagggtttgaagatcatgaac
cttggaggtgcgggtactgcagaaggtgtagctgctgttcttcaggacaatgatgatgac
gatgctgttgaccctcatcttgagcgtatcagaaaccaagctgctgatgagagtgatgag
gaggacgaagactttgttggggctgaggatgacgacggtggctcaccgactgatgattct
ggcgaggacgacgactctgatgctagtgacgctgacggaggcgagaaagagaaatctgtt
aagaaggagcccaagaaagaggcttcgtcttcgaaaggattgcctctgaagaagaaagcg
ttggccacagaagaaggaagtagtaagaagaagacgcagaagaagaagaaggatcccaat
gcacctaagaaggcaatgtctggtttcatgtacttctcccaaatggaaagagacaacata
aagaagagtaacccaggaataggatttggagatataggaaaggtgcttggagataagtgg
cgtcagatgtctgctgaggaaaaagagccgtatgaagctaaggcgcaagttgacaagaag
cgatacaaggatgagattagcgattacaagaaccctcagcccatgcttgtagactctgga
aacgattccgacagtaactaa
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