KEGG   Brassica napus (rape): 106421606
Entry
106421606         CDS       T04128                                 
Name
(RefSeq) FACT complex subunit SSRP1
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bna03000]
    106421606
   03036 Chromosome and associated proteins [BR:bna03036]
    106421606
Transcription factors [BR:bna03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    106421606
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     106421606
SSDB
Motif
Pfam: PH1_SSRP1-like POB3_N SSrecog Rttp106-like_middle HMG_box HMG_box_2 HMG_WDHD1 CDC45 HMG_box_5 YL1
Other DBs
NCBI-GeneID: 106421606
NCBI-ProteinID: XP_013717889
UniProt: A0A078EWY5
LinkDB
Position
C2:51819600..51823245
AA seq 646 aa
MTDVHSFNNISLSGRGGSNPGLLKINSGGIQWKKQGGGKAVEVDKSDIVGVSWMKVPRTN
QLGVKTKDGLYYKFIGFRDQDVASLTIFFQSAFGKTPEEKQLSVSGRNWGEVDLNGNNLT
FLVGGKQAFEVSLADVSQTQLQGKNDVLLEFHVDDTAGANEKDSLMEISFHIPNTNTQFV
GDETRPPAQVFHDNILKVADVGAGVEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDSVVESELSIS
DDLMNTRFKDKLERSYKGFIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDG
VLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLSIRLKTDHEHLFRNIQ
RNEYHNLYSFISSKGLKIMNLGGAGTAEGVAAVLQDNDDDDAVDPHLERIRNQAADESDE
EDEDFVGAEDDDGGSPTDDSGEDDDSDASDADGGEKEKSVKKEPKKEASSSKGLPLKKKA
LATEEGSSKKKTQKKKKDPNAPKKAMSGFMYFSQMERDNIKKSNPGIGFGDIGKVLGDKW
RQMSAEEKEPYEAKAQVDKKRYKDEISDYKNPQPMLVDSGNDSDSN
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgacggacgttcattccttcaacaacatctccctcagcggccgcggcggatcgaaccct
ggactccttaagatcaactcaggagggatccaatggaagaagcaaggcggcggcaaagct
gtggaggtcgacaaatcggacatcgtgggcgtgagctggatgaaggttccgaggactaac
cagcttggtgtcaaaaccaaagacgggttgtactataagttcattggctttcgtgatcag
gatgttgcgagcttgaccatctttttccaaagtgcgtttgggaaaacgcctgaagagaag
cagctctctgttagtggtcgcaattggggtgaggtggacttgaatgggaataatttaaca
tttttggttggtggaaagcaagcttttgaagtgtctctggctgatgtgtcacagactcag
ctccaagggaaaaatgacgtcttgttggagtttcatgttgatgacactgctggtgccaat
gagaaagactcgttgatggagataagttttcatattcctaataccaacacccagtttgtt
ggtgatgaaactcgtccccctgctcaagttttccatgacaatatcttgaaagtggctgat
gttggtgctggtgttgaggaggccgtcgtcacatttgagggtattgcaatcctcactccc
aggggtcggtacaatgtggagcttcacctttctttcttgcgtctgcaaggacaagccaat
gactttaaaattcagtacagtagtgttgtccgcttgtttttgcttccaaagtcaaaccag
ccacacacgtttgttgttatctctctagacccaccaatccggaaaggtcagactctgtac
ccccatattgtgatgcagtttgagacagactctgtcgtcgaaagtgaactctcaattagt
gatgatcttatgaatacaaggttcaaggacaagttggaacgatcatataagggtttcata
catgaagtgttcaccaccgtgttgcgttggctgtctggtgcaaagatcactaaaccaggg
aagttccgcagttcccaagatgggtttgcagtgaaatcatctcttaaggcagaagatggt
gttctctatcccctcgagaagggctttttcttcttacctaaacctccaacgcttatactt
catgatgagattgactatgtggagtttgaaaggcatgctgctggtggtgctaacatgcat
tacttcgatctctccataagactgaaaactgatcatgaacatctcttccggaatattcag
aggaatgagtatcacaatctctattccttcataagctctaagggtttgaagatcatgaac
cttggaggtgcgggtactgcagaaggtgtagctgctgttcttcaggacaatgatgatgac
gatgctgttgaccctcatcttgagcgtatcagaaaccaagctgctgatgagagtgatgag
gaggacgaagactttgttggggctgaggatgacgacggtggctcaccgactgatgattct
ggcgaggacgacgactctgatgctagtgacgctgacggaggcgagaaagagaaatctgtt
aagaaggagcccaagaaagaggcttcgtcttcgaaaggattgcctctgaagaagaaagcg
ttggccacagaagaaggaagtagtaagaagaagacgcagaagaagaagaaggatcccaat
gcacctaagaaggcaatgtctggtttcatgtacttctcccaaatggaaagagacaacata
aagaagagtaacccaggaataggatttggagatataggaaaggtgcttggagataagtgg
cgtcagatgtctgctgaggaaaaagagccgtatgaagctaaggcgcaagttgacaagaag
cgatacaaggatgagattagcgattacaagaaccctcagcccatgcttgtagactctgga
aacgattccgacagtaactaa

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