Brassica napus (rape): 106421940
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Entry
106421940 CDS
T04128
Name
(RefSeq) calnexin homolog 1
KO
K08054
calnexin
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
bna04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106421940
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106421940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bna03110
]
106421940
04131 Membrane trafficking [BR:
bna04131
]
106421940
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
bna04091
]
106421940
Chaperones and folding catalysts [BR:
bna03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
106421940
Membrane trafficking [BR:
bna04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
106421940
Autophagy
ER-phagy
Other ER-phagy associated proteins
106421940
Lectins [BR:
bna04091
]
L-type lectins
106421940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Vma12
CFAP143
Motif
Other DBs
NCBI-GeneID:
106421940
NCBI-ProteinID:
XP_013718221
UniProt:
A0A816IE59
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All DBs
Position
C3:42166477..42169192
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AA seq
531 aa
AA seq
DB search
MMRNRQLLSGLLLILAFVSLQKLCYCDDQTVLYESFDEPFEGRWIVSKNGDYEGVWKHAK
SEGHDDYGLLVSEKARKYGIVKELDEPLSLKDGTVVLQYEVRFQEGLECGGAYLKYLRPQ
EAGWTAEGFNSESPYSIMFGPDKCGATNKVHFILKHKNPKSGEYVEHHLKFPPSVPHDKL
SHVYTAIVKPDNEVRILVDGEEKKKANLLSGEDFEPALIPDKTIPDPEDKKPEDWDERAK
IPDPSAVKPDDWDEDAPMEIADEEAEKPEGWLDDEPEEVDDPEATKPEDWDDEEDGMWEA
PKIDNPKCETAPGCGEWKRPMKKNPAYKGKWSAPLIDNPAYKGIWKPRDIPNPDYFELDR
PNYEPIAAIGIEIWTMQDGILFDNMLIAKDEKVAETYRQTTWKPKFDVEKEKQKAEEEAA
GSADGLKSYQKVVFDLLNKVADISFLSAYKSKITELIEKAEEQPNLTIGVLVSIVVVFFS
LFIKLIFGGKKAAATVEKKKPEVGESSKSEDEAEKKEETAAPRKRQPRRDN
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaaccggcaactattatccggccttttgcttatcttagctttcgtttcgctc
cagaagctttgctactgtgacgatcagacggtgttgtatgaatcgttcgatgagccattc
gaaggtcgctggatcgtttcgaagaatggtgattacgaaggtgtatggaagcatgcaaag
agtgagggacatgatgattatggacttctcgtaagcgagaaggcccgtaagtatggtatt
gtgaaagagcttgacgagcccctaagcctcaaggatggaacagttgttcttcagtacgag
gttcgtttccaggaggggcttgagtgtggtggtgcttacttgaaatacctccgtcctcaa
gaagctggatggactgctgaggggttcaatagtgaatctccttactctatcatgtttggg
cctgacaagtgtggagccactaacaaagtgcatttcatcttgaagcacaagaatcccaag
agtggcgagtacgtcgagcaccacctcaagttccctccctctgttcctcatgacaagctt
tcccatgtctacaccgccatcgtgaagcccgacaacgaggttagaattttggttgatgga
gaggagaagaaaaaggctaatttactctctggagaagactttgagcctgcattgatccct
gacaagaccatccctgaccctgaggacaagaaaccagaagactgggatgaaagagccaag
attcctgatcctagtgccgtgaagcctgacgactgggacgaggatgcacccatggagatc
gcagatgaggaagctgagaaaccagaaggatggttagacgatgagcctgaggaggttgac
gacccagaggcgaccaaacctgaagattgggatgatgaggaagatggtatgtgggaggct
ccaaagattgacaaccccaagtgtgaaacagcaccaggttgtggtgaatggaagagaccg
atgaagaagaaccctgcttacaagggcaagtggagtgcacctctcatagataaccctgct
tacaagggaatctggaaacccagagacatccctaaccctgactactttgagctagacaga
cccaattacgaacccattgcagccataggtatagagatctggacaatgcaagacggtatc
ttgtttgacaacatgttgatagcgaaagacgagaaggtcgccgagacttacagacagacc
acttggaagcctaagtttgatgttgagaaagagaaacaaaaggcagaagaggaagctgct
ggctctgcagatggtctcaagagctaccagaaggttgtgttcgacctcttgaacaaggtt
gcagacatttctttcctaagtgcgtacaagtctaagatcacggaactgattgagaaagct
gaggaacaaccaaacttaaccattggtgtcctcgtctccattgtcgtagtatttttctcg
ctcttcatcaagcttatcttcggtgggaagaaggcggcagcaactgtggaaaagaagaaa
ccagaagtaggagagagctcaaaaagtgaagatgaggcagagaagaaggaagaaaccgct
gctccacgcaaaaggcaaccgagacgtgataattag
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