Brassica napus (rape): 106421949
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Entry
106421949 CDS
T04128
Name
(RefSeq) ABC transporter C family member 8 isoform X1
Organism
bna
Brassica napus (rape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_29
MMR_HSR1
AAA_16
Dynamin_N
AAA_22
RsgA_GTPase
AAA_23
MeaB
nSTAND1
FKBP_N_2
DO-GTPase2
DUF87
YobI-ATPase
Motif
Other DBs
NCBI-GeneID:
106421949
NCBI-ProteinID:
XP_013718236
LinkDB
All DBs
AA seq
1465 aa
AA seq
DB search
MAVSIGGLPWCEVELNLGSKCFQRTTIDLVNLLFLSFFYLLLIAGCVSQRFTLGSRKKGW
IFVAAAICCVATSIVYLGAGLKNLIAGANDEVSWVACFVEGIIWVSLTVSLLVNGSKWIK
ILASVWWVSFALLDSAAKIELLSQGKSIRIFDIITLLISLLLLLCSWMNLRSSPEAQDYS
TSVLSDPLLAENPRKNSVRLATAGFFSFLSFSWMNSLLSLGFKKPLTPDDIPSVVPEDEA
ELAYTKFSKAWDDALLSEPEGAKERNLVFRAVAKVYFKENILTAVCALFRTIAVVSLPLM
LYVFVDYANSDHRDLRTGFLNLACLVMLKLVESLSMRHWYFAARRSGMRIRSALMVAAYK
KQLKLSSLGRKRHSSGEIVNYIAVDAYRMGEFLWWFHSGWSLTLQLLLSTTVLFGVVGVG
AVPGLILLLLCGLLNLPFAKMLQNCQTQFMIAQDKRLRSTSEILNSMKVIKLQSWEEEFK
KQIESCRDEEFKWLAKAQLTKAFGTFLYWMSPTIVSSVIFVGCALMNSAPLNASTIFTVL
ATLRVMSEPVRVIPEAISAIIQVNVSFDRINNFLLDDELKIDEIERRGVEKSGTAVDIQA
GNFSWDPETKHPTLRNINLEIKNGQKVAVCGPVGAGKSSLLHAVLGEIPKVSGTVKVSGS
IAYVSQTSWIQSGTIRDNILYGKPMEIRRYNAAIKACALDKDINDFGHGDLTEIGQRGLN
LSGGQKQRIQLARAVYADADVYLLDDPFSAVDAHTAGVLFHKCVEDSLREKTVILVTHQV
EFLSEVDQILVMEEGRITQLGKYEELLMMGTAFKQLVNAHNDAVTVLPLASNESLGDLTK
VGRDREIGNIQVVEKIEEEITTTTNVPGAQLTQEEEKEAGYVGLKPFLDYLNVSSGWFLL
SSSVLGQVGFVVFQAASTYWLAYGIGIPKLTATMLIGVYSVISTLSAGFVYARAVTTAHL
GLKASKAFFSGFTNAVFKAPMLFFDSTPVGRILTRASSDLNVLDFDIPFAIIFVVSPAVE
LTAALIVMTYVTWQVIIIALLALAATKVVQEYYLASARELIRINGTTKAPVMNYAAETSL
GVVTIRAFGTVDRFFKNYLNLVDADAVLFFLSNAAMEWVILRIETLQNLTLFTCALLLIL
IPKGYIAPGLVGLSLSYALTLTQTQVFLTRWYCTLSNSIISVERIKQYMSIPAEPPAVVD
DKRPPSSWPSSGTIHLQELKIRYRPNAPLVLKGISCTFREGTRVGVVGRTGSGKSTLISA
LFRLVEPASGCILIDGIDISKIGLKDLRMKLSIIPQEPTLFRGCIRTNLDPLGVYSDDEI
WKALEKCQLKATISNLPNKLDSSVSDEGENWSVGQRQLFCLGRVLLKRNKILVLDEATAS
IDSATDAIIQRIIREEFADCTVVTVAHRVPTVIDSDMVMVLSFGDLVEYNEPSKLMETDS
YFSKLVAEYWASCRGNSSQNLQAHI
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttccattgggggccttccatggtgtgaagttgagctaaatcttggctctaaa
tgcttccagagaacgaccatagatctcgttaatctactgttcctctccttcttctacttg
ctattgatagctggttgtgtttcacagcgttttactcttgggagccgcaagaaaggctgg
atctttgttgctgcagctatatgctgtgttgctactagcattgtatatcttggtgctgga
ctgaagaatctaattgctggtgctaatgatgaagtctcatgggttgcttgctttgttgaa
gggatcatttgggtttcacttacggtttcactgcttgttaacggctccaagtggatcaag
attctcgcatctgtttggtgggtgtcttttgctttgctggattcagcagcaaagattgag
ctactttctcaggggaaaagcatcagaatatttgacatcattaccttgctgataagcctt
ttgcttcttctttgctcctggatgaacttgagatcttctccagaagctcaagattacagc
acatcagttctttctgatcctctattagctgagaatcctaggaaaaactcggtgaggtta
gcaacagctgggtttttcagctttctatccttctcttggatgaactctttactctcgttg
ggcttcaagaaaccattaaccccagacgatatcccaagtgttgtcccggaggatgaggct
gagttagcttacactaaattctccaaagcatgggatgatgctcttctctcagagccagag
ggagccaaggaaagaaacttggtgttcagagccgttgcaaaagtctacttcaaggagaac
atactcacagcagtttgtgcactcttccgaacaatagctgtagtatctcttcctctaatg
ctatacgtcttcgtggattatgcaaacagtgaccaccgcgatctccgcactggtttcctc
aacttagcttgtctagttatgctgaagctcgttgagtccttgtcaatgagacactggtac
tttgcagcaagaagatcagggatgaggattagatcagcgctgatggtcgctgcatacaaa
aagcagctgaagttgtcaagcttagggaggaaaagacattcatctggagagattgtgaac
tacatcgctgtggatgcgtatcgaatgggagagttcttgtggtggttccactcaggatgg
agccttacgctgcagcttttgctttccacaactgtacttttcggagtagttggagtagga
gctgttccaggtttgattcttcttctcctctgcggtcttcttaatctaccgtttgcaaag
atgctgcagaactgccagacccagttcatgatcgcgcaggataaacgattaagatccact
tcggagattctgaacagtatgaaagtcattaagctgcagtcatgggaagaggagttcaag
aaacagatagagtcttgccgtgatgaggagttcaaatggttggctaaggctcagctgaca
aaggcctttggtactttcttgtattggatgtctccaacaatagtttcttctgttatcttt
gtggggtgtgctttaatgaacagcgcgccactgaacgcaagcaccatcttcacggtttta
gctacgctgagagttatgtcagagccggttagagttatacctgaggcaatttctgctatc
atacaagtgaacgtctcttttgataggatcaacaactttttgcttgatgatgagctcaag
attgacgagattgaaagaaggggtgtggagaaatctggaacagcagttgatatacaagca
gggaacttcagttgggatccagaaactaagcatccaactcttcgaaatataaatttggaa
atcaagaatgggcaaaaagttgcggtttgtggaccagttggtgcaggtaaatcatctctg
ttgcatgcagtgctcggagaaatacctaaagtttctggaactgtaaaggtctctgggtca
attgcttatgtttcacagacctcttggatccaaagtggtaccatcagggataacatcctt
tatgggaagccaatggaaattagacgatataacgctgctattaaagcatgtgctttggat
aaggacataaatgattttggacatggggacctcacagagataggacaaagagggcttaac
ttgagcggaggacaaaagcaaaggattcagctggcgcgtgctgtctatgctgatgctgat
gtttacctccttgatgatccttttagtgctgttgatgcacatacagctggagttcttttt
cataaatgtgttgaggactcgctgagggagaaaactgtcattctggtcactcaccaagtt
gaattcctctcagaagttgatcaaattctggttatggaagaaggaagaatcactcagtta
ggaaagtatgaggagctcttaatgatgggaacggcattcaaacagctggtgaatgctcat
aacgatgcagtaactgtgttacctttggctagtaatgaaagcctaggagatcttaccaaa
gtgggcagagacagagagataggaaacatccaggttgtagagaaaatcgaagaagagatc
acaacaacaaccaatgttccaggggcacaacttacacaggaagaggaaaaggaggcgggc
tatgttggattgaaacctttcttggactatctaaatgtctccagcggatggtttcttctg
tcgtcaagcgtattgggtcaggtcggctttgtagtttttcaggccgcatcaacatactgg
ctggcttatggaattgggatccctaaactcacagcaacaatgcttattggagtctatagc
gtcatctcaactcttagtgctggttttgtatacgcgagagctgtaacgactgcccatctt
ggactaaaagcttctaaagctttcttctctggtttcacaaatgcagtcttcaaagcacca
atgcttttctttgattctactccagttggacgcattctcacccgagcatcatctgattta
aacgtcttggactttgacattccatttgcaatcatatttgtcgtatcacctgccgttgag
ctcactgctgcactaatcgtcatgacatatgtgacatggcaagttatcattatcgctctt
cttgctttagcggccacgaaagttgttcaggagtactatttagcctctgcaagggagctg
attaggatcaatggaacaaccaaagctccagtgatgaactatgctgcagaaacctcgctt
ggagtggtgacaataagagctttcggaactgtagatagattcttcaaaaactacctaaac
ctagtggacgcagatgctgtgctgttctttctgtctaatgcagccatggagtgggtgatt
ctgaggatagagactcttcagaatttgactttattcacttgtgcacttctgcttatcctt
attcccaagggctacatagctccaggtcttgttgggctttcactatcctatgcactgaca
ctgacacaaactcaggtctttctaactagatggtattgtaccttatcgaattcaatcatt
tcggtagagaggataaaacagtatatgagcataccagcagagcctcctgcagttgttgat
gataaaaggccaccttcctcatggccatccagtggtaccattcacctgcaggaacttaag
ataagataccgacccaatgctcccttggttctcaaaggaatctcttgcacattcagggaa
gggacaagagtgggagttgtggggagaacgggaagtgggaaaagcacgttgatcagtgct
ttgttccggttggtggaaccagcaagtggttgtatattgattgatggcattgacataagt
aagattggtctaaaagacctgagaatgaaactcagcatcattcctcaagaaccaactctc
ttccgtggctgcataaggaccaaccttgatcctttaggtgtttactctgatgatgaaata
tggaaggctcttgagaagtgtcagcttaaggccaccattagcaatctacctaataaactt
gattcttcagtgagtgatgaaggagagaactggagcgtgggacagaggcagctgttctgt
cttggaagagtcttattaaagagaaacaaaatattggtgttggatgaagctacggcttcc
atagattcagccactgatgcaatcatccagagaatcataagagaggagttcgcagattgc
acggtggtaacagttgcacatagagttccaacggttatagatagtgacatggtcatggtt
ctctcctttggtgatcttgtggagtacaacgagccttcaaagctgatggagactgattct
tacttctccaagctcgttgctgagtattgggcaagctgcagaggaaactcttctcagaat
ctacaagctcacatctaa
DBGET
integrated database retrieval system
