Brassica napus (rape): 106422357
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Entry
106422357 CDS
T04128
Name
(RefSeq) long chain acyl-CoA synthetase 5
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00071
Fatty acid degradation
bna01100
Metabolic pathways
bna01212
Fatty acid metabolism
bna04146
Peroxisome
Module
bna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106422357
00071 Fatty acid degradation
106422357
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106422357
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bna01004
]
106422357
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106422357
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
106422357
Lipid biosynthesis proteins [BR:
bna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106422357
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of breast milk
106422357
Exosomal proteins of breast cancer cells
106422357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
106422357
NCBI-ProteinID:
XP_013718606
UniProt:
A0A816P1V3
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All DBs
Position
A9:complement(18626557..18632687)
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AA seq
666 aa
AA seq
DB search
MTSQKRFIFEVEAAKEATDGKPSIGPVYRSTFAKDGFPNPIDGIDSCWDIFRTAVEKYPN
NRMLGRREIVNNKAGKYEWKTYKEVYDIVLKLGNSLRSCGIEEGGKCGIYGANCPEWIIS
MEACNAHGLYCVPFYDTLGSGAVEFIISHAEVSIAFVEEKKIPELFKTCPNSTKYMKTVV
SFGGVKSEQKEEAEKLGLVIHAWDEFLKLGEGKQYDLPVKKKSDICTIMYTSGTTGDPKG
VLMSNESIVTITAGVRHFLAIFNESLTEKDVYISYLPLAHVFDRAVEECIIHVGGSIGFW
RGDVKLLIEDLGELKPSIFCAVPRVLERVYTGLQQKLSVGGFFKKKVFNVAFSYKFGNMK
KGQSHVEAAPFCDKLVFNKVKQGLGGNVRIILSGAAPLASHIESFLRVVACCHVLQGYGL
TESCAGTFVTFPDELDMLGTVGPPVPNVDIRLESVPDMEYDALGSIPRGEICIRGKTLFS
GYHKREDLTKEVLIDGWFHTGDVGEWQPDGSMKIIDRKKNIFKLAQGEYVAVENLENVYG
QVEAIDSIWVYGNSFESFLIAVANPSQQTLERWAAENGVNGDFDSICQNTKAKAFLLGEL
VKTAKERKLKGFEIIRAVHLEPVPFDIERDLLTPTYKKKRPQLLKYYQNVIDDMYKTAKE
GQASVQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacagaagagattcatcttcgaggtggaagctgctaaggaagccaccgatgga
aaaccctccattggtcctgtctatcgcagtactttcgccaaagacggtttccctaaccct
atcgacgggatcgacagctgttgggatattttccgcacggctgttgagaaatatccaaac
aatcgcatgcttggtcgacgtgagattgtgaacaacaaggcaggaaagtatgagtggaaa
acatacaaagaagtatatgacattgtcctaaaacttggaaactctctccgtagctgcggg
attgaggagggaggaaaatgtggtatttatggtgcaaactgtcctgagtggattataagc
atggaggcatgcaatgcacatgggctctattgtgttcctttttacgatactttaggctct
ggtgcggtggagtttattatttcccatgcagaagtttccattgcttttgtagaggagaaa
aagattcctgagctttttaagacatgtccaaactccacaaagtatatgaagactgttgtg
agctttggcggtgtcaaatcggaacagaaagaagaagctgaaaagttaggactggtaata
catgcttgggatgagttcttgaagctgggtgaaggtaaacaatatgatcttcctgttaaa
aagaaaagtgacatttgcacaattatgtatactagcggaaccactggtgacccaaaggga
gttctgatgtcaaatgagagcattgttaccataacagctggagtgaggcatttcttagcg
atttttaacgaatcccttactgagaaggatgtctacatatcttatcttcctcttgcgcac
gtctttgaccgggctgtggaggagtgcattattcatgttggtggttcaatcggtttctgg
cgcggggatgttaagttgttgattgaagaccttggtgagctaaagccaagtattttctgc
gctgttcctcgtgtcctagaacgagtatacacaggtctgcagcaaaaactatccgttggt
ggtttcttcaaaaagaaagttttcaatgttgctttctcctataaatttggaaatatgaag
aaggggcagtctcatgtcgaagcagctccattctgtgacaaacttgtcttcaacaaggtt
aaacaaggactgggaggcaatgtgaggattattctatctggagcagctcctcttgctagt
cacatagagtcatttcttagagttgtggcatgttgtcatgttctacaaggatatggtcta
actgagagctgtgctggtacatttgtcaccttccctgacgaacttgacatgcttggaact
gttggtccaccagttccaaacgtggatattcgcctagaatctgtccctgacatggaatac
gatgctcttggaagtattccgcgaggcgaaatctgcatccgtgggaaaactctgttttct
ggataccacaaacgtgaagacctcaccaaagaggttcttattgatggatggtttcacaca
ggtgatgttggtgagtggcaaccagatggaagcatgaagataattgaccgcaaaaagaac
atcttcaaactcgcgcaaggggagtacgttgcagttgagaatttagaaaatgtgtatggt
caagtagaagccattgattcaatatgggtgtatgggaacagctttgagtccttccttata
gcagtcgctaacccaagtcagcaaactcttgaacgctgggccgcggagaatggagtgaat
ggagacttcgactctatatgtcaaaacacaaaagcgaaagcatttttacttggagaactc
gttaagacagcaaaagagagaaagttgaagggttttgagatcattagagctgttcatttg
gaacctgtgcctttcgacattgaaagagaccttcttactcctacctacaagaagaagagg
cctcaattgctcaaatactatcagaatgtgattgatgatatgtacaagactgcaaaggaa
ggtcaagcttcagtacagtag
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