Brassica napus (rape): 106422381
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Entry
106422381 CDS
T04128
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 6 isoform X2
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106422381
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106422381
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106422381
03019 Messenger RNA biogenesis [BR:
bna03019
]
106422381
03041 Spliceosome [BR:
bna03041
]
106422381
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
106422381
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
106422381
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106422381
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106422381
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106422381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
106422381
NCBI-ProteinID:
XP_013718627
LinkDB
All DBs
Position
A9:complement(18428151..18429825)
Genome browser
AA seq
320 aa
AA seq
DB search
MDENLLDDIIRRLLETNNGKQVKLLEAEIRQLCSASKEVFLSQPNLLELEAPIKICGDVH
GQFPDLLRLFEYGGYPPAANYLFLGDYVDRGKQSIETICLLLAYKLKYKLNFFLLRGNHE
CASINRVYGFYDECKRRYNVRLWKSFTDCFNCLPVAALIDDKILCMHGGLSPDLKTLDDI
RRIPRPVDVPDQGVLCDLLWADPDKDIQGWGENDRGVSFTFGPDKVAEFLQTHDLDLVCR
AHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDSLTCSFQILKSTEKKGGRF
GYSNNVHRPGTPPHKGGKGG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaatttgctggacgatataatacggcggctgttggagactaacaacgggaag
caggtgaagctactcgaggctgagatacgccagctctgctctgcttccaaagaggttttt
ctcagccagcctaatctcctcgagctcgaggctcctatcaagatttgcggtgatgttcat
ggtcagtttccagacctcttgcggttgtttgagtatggcggctaccctccagctgcaaat
tatttgttcctcggagactacgttgatcgtggtaagcagagcatagagaccatatgcctt
ctccttgcctacaagctcaaatacaagctcaacttctttctcctcagaggcaatcacgaa
tgcgcttctatcaaccgtgtttacggcttctacgatgagtgcaagagaagatacaacgtg
cgcctgtggaagagtttcaccgactgtttcaactgtctccccgttgctgctctcatcgac
gacaagatcctctgtatgcacggtggactttctcctgatctcaagaccttggatgatatc
aggcggattcctcgtcctgttgatgttcctgatcagggcgtcctttgtgatttgttatgg
gctgatcctgacaaagatatccaaggctggggggagaatgacagaggcgtttcttttacc
tttggtcccgacaaagtggctgagttcctccagactcatgaccttgatcttgtttgccga
gctcatcaggttgtagaagatggatatgagttctttgcaaagagacaactggtgacaata
ttctctgcacccaactactgtggtgagtttgacaatgctggcgcgatgatgagtgttgat
gatagcttgacatgttctttccaaatcctcaagtcaactgagaagaaaggaggaagattt
ggatacagcaacaacgttcataggccaggaacaccacctcataagggaggaaaaggtggt
tga
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