Brassica napus (rape): 106422719
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Entry
106422719 CDS
T04128
Name
(RefSeq) pectinesterase PPME1
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106422719
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
106422719
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GFIT
Motif
Pfam:
Pectinesterase
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
106422719
NCBI-ProteinID:
XP_013718949
UniProt:
A0A078IXZ1
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Position
C2:1160193..1162232
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AA seq
363 aa
AA seq
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MGYIHVSMLLAMVMVFVTPMVLADDNTPIPEAKPQAEQWFKTNVAPLPSRKGLDPALVAA
EASPRTINVNPKGGEFKTLTDALKSIPEKNTKRVIIKMAPGEYKEKVTIDKKKPFITLMG
DPKAMPVLTYDGTAAQYGTVNSASLIILSDYFIAVNIIVKNSAPKPDGKRKGAQALAMRI
SGNNAAFYNCKFHGFQDTLCDDAGNHFFKDCYIEGTFDFIFGSGTSMYLDTQLHAVGDGI
KVISAHAGKSAEEKSGYSFVHCKVTGDGGGIYLGRSWKSHPKVVYAYTEMSSLVNPTGWK
ANKVAAHDKTVFYGEYKCTGPGSHTAKRVPFTQDIDENEANRFLSLGYIKGSSWLLPPPG
FKV
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgggatacatacatgtgtccatgttattagccatggttatggtgtttgttactccgatg
gtgttggcagatgataacacaccaattccagaggccaaacctcaagcggagcagtggttc
aaaaccaacgtagctcctttgccttcacgtaaaggtttagatcctgctctcgtagctgct
gaggcttcaccacgtaccatcaacgtgaatccaaagggaggtgaattcaaaacactaacc
gacgcactaaagagcattcctgaaaagaacacaaagcgtgtgatcatcaaaatggctcct
ggagaatacaaagagaaggtcactatcgacaaaaagaaacccttcattacattaatggga
gatcccaaggccatgccggttcttacatacgacggtactgccgcccagtatggaaccgta
aatagtgcctctctcattatcttatccgactatttcattgccgtcaacatcatcgttaag
aactctgcaccgaaaccagatggtaaaaggaagggagcacaggccttagctatgagaatc
tccgggaacaatgcggctttctacaactgcaaattccacggtttccaagatacgctttgt
gacgatgctggaaaccatttctttaaggattgttacattgaagggacatttgatttcatc
ttcggaagtggaacctctatgtatttggacacacaattgcacgcggtgggagatggtatt
aaagtgatttcagcgcatgccggaaagagcgcagaagagaagagcggatactctttcgtg
cactgcaaggtaactggggatggtggtggaatctatttaggtagatcatggaagagtcac
cctaaggttgtctacgcctacaccgagatgagcagtctcgtcaacccaaccggatggaaa
gcaaacaaggtggccgcacatgacaagaccgtgttctacggagagtacaagtgcacagga
ccaggatcacacacagccaagagagttccattcacacaagacattgacgaaaatgaagct
aaccgtttcctttccctcggctacatcaaaggatcctcgtggcttctcccacctcccggc
tttaaggtttaa
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