Brassica napus (rape): 106422766
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Entry
106422766 CDS
T04128
Name
(RefSeq) ubiquitin C-terminal hydrolase 12 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Pathway
bna03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106422766
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106422766
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106422766
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106422766
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106422766
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106422766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
RA
ubiquitin
SASP
Malt_amylase_C
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
106422766
NCBI-ProteinID:
XP_048602654
LinkDB
All DBs
Position
C2:complement(1017169..1025969)
Genome browser
AA seq
1116 aa
AA seq
DB search
MTMVTPPPVDQQEDEEMLVPHSDLVEDPAQPMEVSETETAVSTVENQPAAEEPPTLKFTW
TIPHFSRINTRKQYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAASLPYGWSRYAQ
FSLAVVNQVHTRYTIRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLANDTVYIEAEV
VVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPT
ASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKG
TVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERL
EGDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDSMVKINDRYEFPLELDL
DREDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKE
DLKRALEEQYGGEEELPQTNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA
EHLRVRLKKEQEEKEDKRKYKAQAHLFTIIKVARDQDLKEQIGKDIYFDLVDHDKVRSFR
IQKQTPFQQFKEEVAKEFGIPVQCQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREAS
NKANTAELKLFLEVELLDERPIPPPEKSKDDILLFFKLYDPEKPELRYVGRLMVKSSSKP
MDITGKLNEMAGFAPDEEIELFEEIKFEPGVMCEHLDKKNSFRLCQIEDGDIICFQKPVV
NKEIECRYPAVPLFLEYVQNRQLVRFRALEKPKEDEFVLELSKLHTYDDVVERVAEKLGL
DDPSKLRLTSHNCYSQQPKPQPIKYRGVDRLSDMLVHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHHSTKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRILEVFYHKIYK
IFPLTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQVQNFGEPFF
LVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDSDVVYNRFQRRDVYG
AFEQYLGLEHTDTTPKRAYAANQNRHAYEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactatggtgactccgcctcccgtcgatcagcaagaggatgaggagatgcttgttccg
cattcagatttggttgaggatcctgctcagcctatggaagtttccgaaactgagactgct
gtgagcactgtggagaatcagccagcagctgaggagcctcccactctgaaattcacgtgg
actatcccacacttctcgaggattaacaccaggaagcagtactccgatgtgtttgttgtt
ggaggttacaaatggcgcatattgattttcccgaaagggaacaatgttgaccatttgtcc
atgtacttggatgttgctgatgctgcgagtttgccttacggttggagcaggtatgctcag
ttcagcctggctgttgtcaatcaagtccacaccagatacaccattagaaaagaaacgcag
catcaattcaacgcgagagaaagcgactggggatttacgtcattcatgcctcttagcgaa
ctttatgatccgagtagaggatatctggcgaatgatactgtttacattgaagctgaagtc
gttgtgcgtaaggttcttgattattggtcttacgattccaaaaaagagaccgggtttgtt
ggtctcaagaaccaaggtgcaacttgttacatgaattctcttctacagacactataccac
attccttacttcagaaaggctgtataccacatgccaacaactgagaacgatgcgcctaca
gcgagtatacctttggctctccaaagtttgttttacaagctccaatataacgacaccagt
gttgcgacaaaagagctgacaaagtcgtttggttgggacacatatgattctttcatgcaa
catgatgtccaagaactcaatagagttctctgcgagaaacttgaggataaaatgaaggga
actgttgtggagggaacaatacaacagctatttgaggggcaccacatgaattatatcgag
tgcataaatgtagattataaatctacacggaaagaatcattttatgaccttcagctggat
gttaaaggctgcaaggatgtttatgcttcttttgacaaatatgttgaagttgaacgcctt
gaaggagacaacaaatatcatgcagaaggacacggattacaggatgcaaaaaaaggtgtt
cttttcatagactttccaccggttcttcagctccagctcaaaaggtttgaatatgacttc
atgagggattccatggtgaagataaatgatcgctatgaatttccgctggaactggatctt
gatagagaggatgggaagtatttatcccctgatgctgacaggagtgtccgcaacctttat
acacttcacagtgtcttagttcatagtggaggagtacatggtgggcattattacgcattt
ataaggcccacgctctcagatcaatggtataaatttgatgatgaacgagtaaccaaagaa
gatttgaaaagggcactggaggagcaatatggtggtgaagaggagctaccacaaactaat
cctggtttcaataaccctcctttcaaattcacaaagtactcgaatgcatatatgcttgta
tatatccgggaaagtgacaaagataaaataatctgcaacgttgatgagaaagacattgct
gagcacttaagggtgaggctgaagaaggaacaagaagaaaaggaagacaaaagaaaatac
aaggcacaagctcacctttttacgataattaaggttgcaagagatcaagaccttaaggaa
caaattgggaaggatatatattttgatcttgttgatcatgacaaagttcgcagtttccgg
atccagaaacagacaccatttcaacagtttaaggaggaggtggccaaggaatttggtata
cctgttcagtgtcagaggttctggatttgggcaaagcgacaaaaccatacctatcgtccc
aatcgcccccttacacctcaggaggaattacaaccggttggacaaattagagaagcatct
aacaaggcaaacactgcagaacttaagctgtttttggaagtagagctgctggatgaacgt
cctattcctcctcctgaaaaatcaaaagacgatattcttcttttctttaagctttatgac
cccgagaagccagagttaaggtatgttggtagactgatggtgaaaagttccagtaagcct
atggatataactggaaaactgaatgaaatggctggctttgctcctgatgaagaaatagaa
ctttttgaggaaatcaagtttgagcctggtgttatgtgcgaacacctagataagaaaaat
tcattcagattgtgtcaaatcgaagatggagatatcatttgctttcagaaacctgttgtt
aacaaggagattgaatgccgctacccagctgtgcctttgtttcttgaatatgtccagaat
cgacagctggtccgatttcgtgctctggaaaaacctaaagaagatgagttcgttctggag
ttgtcaaagttgcacacttatgacgatgtcgtggaaagagtggccgagaagcttggtctt
gacgatccatccaagcttaggcttacatctcacaattgctattcccagcaacccaagcct
cagcctatcaaataccgtggagtagaccgtttatcagacatgttggttcactacaatcag
acgtctgatattttgtattatgaagttctggacattcctcttccagaattgcaaggtctt
aaaaccttgaaagttgctttccatcattccacgaaggaggaagtggtaatccacaatata
agactacctaaacaaagcacagtcggagatgttattaatgaactaaaaacaaaggtggag
ctctcgcatccagatgcagaactgagaatactcgaggtgttttaccacaagatctacaag
atttttccattaactgaaagaattgagaatataaacgaccagtactggactttgcgagct
gaggagattccggaagaagagaaaaacattggtccaaatgatcgcttaattcttgtgtac
cactttgctaaggaaactggacagaatcagcaagtgcaaaactttggggagcccttcttc
ttggtaattcatgaaggtgaaactcttgaagaaatcaagaaccgtatccaaaagaagctt
catgtatcagatgaggactttgccaagtggaagtttgcgttcatgtcaatgggacgtccg
gagtacttgcaggactcagatgttgtttacaatcgctttcagaggagagatgtctatggt
gcttttgagcagtatctggggttggagcacactgataccactcctaagagggcttatgct
gcaaaccagaaccgacacgcttatgagaagccggtgaagatatacaattag
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integrated database retrieval system
