Brassica napus (rape): 106422788
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Entry
106422788 CDS
T04128
Name
(RefSeq) autophagy-related protein 3-like isoform X1
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
bna
Brassica napus (rape)
Pathway
bna04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106422788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106422788
04121 Ubiquitin system [BR:
bna04121
]
106422788
03029 Mitochondrial biogenesis [BR:
bna03029
]
106422788
Membrane trafficking [BR:
bna04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
106422788
Ubiquitin system [BR:
bna04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
106422788
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106422788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
106422788
NCBI-ProteinID:
XP_013719038
LinkDB
All DBs
Position
A2:305119..307085
Genome browser
AA seq
306 aa
AA seq
DB search
MVLSQKIHGAFKGAVERMTGPRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWEAGDPS
KRKPYLPLEKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGRPKDKGS
EDEDLPSMDALEINERDTTQPRCGGDEEEEIPDMEDFDDIDNDPATLQSNLLVAHEPDDD
NILRTRTYDVSITYDKYYQTPRVWLTGYDESRVLLQPELVMEDVSQDHARKTVTIEDHPH
LPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFD
LGSSST
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggtgctttcgcagaagattcatggagcattcaaaggcgcagtggagaggatgacgggt
cctcgaacggtctctgctttcaaggagaagggagttctcagcgtcagcgagttcgttctc
gccggcgacaatctcgtctccaagtgccctacctggtcatgggaagctggtgatccgagc
aaaaggaagccgtatctgccgttggagaagcagtttttgattactaggaatgtaccttgt
ctacgaagagctgcttctgtggcagaggattatgaagctgctggaggtgaagttttggtt
gatgatgaagataatgatggttggcttgctactcatggaagacctaaagataaaggtagt
gaagatgaagacttgccatccatggatgccttggaaataaacgagagagatactactcaa
cctaggtgtggtggagatgaggaggaagagattccagatatggaggattttgatgatatt
gacaatgatcctgcaactcttcagtcgaatttacttgtggctcacgaaccagatgacgat
aatatccttaggaccagaacatatgatgttagcatcacgtatgacaagtattaccaaact
ccccgtgtttggttaaccggctatgatgagtcaagggtgttactgcaacctgaacttgta
atggaggatgttagtcaagaccatgcacgcaaaacggtaacgatagaagatcatccacac
ttgcctgggaaacacgcttcagttcatccatgtcgacatggagctgttatgaagaagatc
attgatgtattaatgtcacgtggagtggagcctgaagttgacaagtatctcttcttgttc
ttgaagtttatggcatcggttattccaacgatagagtatgattacacaatggactttgat
ctcggtagctcaagcacttaa
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integrated database retrieval system
