KEGG   Brassica napus (rape): 106422862
Entry
106422862         CDS       T04128                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH-like
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
bna  Brassica napus (rape)
Pathway
bna03082  ATP-dependent chromatin remodeling
bna03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106422862
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106422862
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bna01009]
    106422862
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    106422862
   03036 Chromosome and associated proteins [BR:bna03036]
    106422862
Protein phosphatases and associated proteins [BR:bna01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106422862
Transcription machinery [BR:bna03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     106422862
    SWI/SNF complex
     106422862
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    106422862
   PBAF complex
    106422862
   SWI/SNF complex
    106422862
SSDB
Motif
Pfam: SNF5 GatZ_KbaZ-like
Other DBs
NCBI-GeneID: 106422862
NCBI-ProteinID: XP_013719105
UniProt: A0A816LB35
LinkDB
Position
C5:46472472..46474886
AA seq 240 aa
MKASGSTNWKGPVKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDADNEIAIFARRTV
KDLKLPPAFVTQITQSIQSQLADFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDL
NNFESDPEEFARTLCKDLGVEDPEVGPAVTFAIREQLYEIAVQSVSSARESRLSKKSRRG
SDYGSASKASGLSMDLVKLFSFKSSVVRKRKDLDVYEPMVDLLTNEEVDALEAREERHAR
NT seq 723 nt   +upstreamnt  +downstreamnt
atgaaggcttcagggtctactaattggaaaggtcccgtcaagttcaggatgcctactgct
gagaacttggtacctattcgtttggacattcaattcgaaggtcagcgttacaaagatgcc
ttcacttggaacccttcagacgcggataatgagatcgctatcttcgctagaaggactgtt
aaagacttgaaacttccacctgcgtttgtcactcagattactcaatctattcagtctcag
ctcgcagactttcgagcatatgaaggacaagatatgtacactggtgaaaaaatcatacca
atcaagcttgatctccgagttaatcacaccctcatcaaggatcagttcttgtgggacctg
aacaatttcgagagtgatcctgaggaattcgcaaggaccttgtgcaaggatttaggtgtt
gaagatcctgaagttggacctgctgttacatttgcaatcagagaacaactttacgagatt
gcagttcaaagtgtgagttcagctagggagagtagattaagcaagaaaagccgcagagga
tctgattatggttcagcgagcaaggcgagtggcttgtcaatggacctagtgaagttattc
agctttaagtccagtgtagttcggaaaaggaaagacttggatgtttatgaaccaatggtg
gatctgctaacaaatgaggaagttgatgctcttgaagccagagaagagaggcatgcacgg
tga

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