Brassica napus (rape): 106423057
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Entry
106423057 CDS
T04128
Name
(RefSeq) transcription factor efuD-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106423057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106423057
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
106423057
Prokaryotic type
Archaeal type
TFE
106423057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
MarR
DUF6396
wHTH-PRTase_assc
Zn_ribbon_8
DZR
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
106423057
NCBI-ProteinID:
XP_013719287
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All DBs
Position
A10:967462..970901
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AA seq
477 aa
AA seq
DB search
MDSKGPVQKTVVLEPFIKLVRLLARAFYDDYTTKSDNQQKTARSDNRGIAVVVLDELTRK
QWVREEDLAKELKLHAKQLRKIIRHFEEQNLIMRDHRKETAKGAKMYSVAVAATTGGRAE
DKVKFHTHSYCCLNYPQIYDIVRYKLHRMKKKLKDELEDKNTVQEYGCPNCQRKYNALDA
LRLISMEDDAFHCENCNGELVVECNKLTSEEVADGDDNARRRRREKLRDMLQKMEVQIKP
LMDQINRVKDLPVPDFGSLIAWEARAAIAARENGELNPNDPLRSQGGYGSTPMPFLGETK
VEVNLGEGKEDVTSNGGDSSLKVLPPWMIKQGMNLTEEQRGEMRHEAKVDVGSSKLSDDK
KSAMESGDAKDLLKDEYFKAYYAALIQQQQELAQKQRQEESGGEVVAPDSELASTSSDRQ
VGMKSKREEEEDEWEEEVAPVPVAGNGNYKVDLNVEAAEASGGEEEEEEEDIDWEEG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggatagtaagggcccggtgcagaaaacagtcgtgctcgagccgtttatcaagttggtg
aggcttttagcaagggctttctatgatgattataccaccaaaagcgacaatcagcagaaa
actgcaagaagtgacaacagagggattgccgttgtggtgctcgatgagcttaccaggaag
caatgggttagagaagaggacttggctaaagagttgaagttgcacgccaagcagcttaga
aaaataatacgacactttgaagaacagaacttgatcatgcgtgaccacaggaaagagact
gcaaaaggtgcgaagatgtatagtgttgcagtagctgctacaactggtggccgagcagag
gacaaggttaagttccatacccactcgtattgctgcctcaattatccacagatatatgat
attgttcgctataaactgcaccggatgaaaaagaagctcaaagatgaactagaagataag
aatactgttcaggagtatggctgtcctaactgccaaagaaaatataatgcattggatgcc
ttgagattaatttctatggaagacgatgctttccactgtgaaaactgcaatggtgagctg
gttgtggaatgtaacaagctaacttcagaagaagtagcagacggagatgataatgcaagg
agacggcggcgggaaaaactaagggatatgcttcagaagatggaggttcaaataaaacct
ctgatggatcaaataaacagagtaaaagacctgccagttcccgactttggatctcttatc
gcatgggaggctcgtgcagctattgctgctcgtgaaaatggcgagcttaaccctaatgat
cctttgaggtcacagggtgggtatggttcaacaccaatgccatttctcggagagacgaag
gttgaggttaaccttggtgagggaaaagaggatgtcacgtccaacggtggagattctagt
ctgaaagtgttgcctccatggatgataaagcaaggaatgaatctgacggaggaacaaaga
ggagagatgaggcatgaagcaaaggttgatgttggctcatcgaaactttcagatgacaag
aagtcagccatggaaagtggcgatgctaaagatttgttgaaggatgagtatttcaaagct
tactacgctgctctgatacagcagcagcaagagctagcacagaagcagagacaagaagaa
tctggaggcgaagtagtagcccctgacagtgagttggcttcgacatcctcagatcgtcag
gttggtatgaagtccaaacgcgaagaggaagaagatgaatgggaagaagaagtggctcca
gttccagttgcaggaaatggaaactacaaggtggacttgaatgtggaagcagcagaggct
tcaggtggtgaagaagaagaggaagaagaagacatcgactgggaagaaggctga
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integrated database retrieval system