Brassica napus (rape): 106423088
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Entry
106423088 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome biogenesis protein 6
KO
K13339
peroxin-6
Organism
bna
Brassica napus (rape)
Pathway
bna04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106423088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106423088
Membrane trafficking [BR:
bna04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
106423088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
RuvB_N
nSTAND3
Rad17
AAA_17
AAA_22
AAA_28
TsaE
NPHP3_N
AAA_18
AAA_33
RNA_helicase
AAA_lid_3
TIP49
AAA_7
DUF815
AAA_14
Parvo_NS1
AAA_3
ATPase
Mg_chelatase
AAA_11
AAA_25
IstB_IS21
Sigma54_activat
AAA_2
Vps4_C
PhoH
AAA_24
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
106423088
NCBI-ProteinID:
XP_048599307
LinkDB
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Position
A10:complement(874713..878685)
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AA seq
826 aa
AA seq
DB search
MQICWRVIFSASPDPLPPRGGENVSDSKFDSFDDSALVGLSTQSLKRLSINAGSLVVINN
IDISIQRIAQVVVLDPPPKTTTLDDASLVLDSLHTMLVFPTYDLMMTQQLLSQEVAYLSP
MLAFNLGLHVSCLKSLVHRGNEVLEKYFVAKFDEGESAVGGSKIGLELACARRKANFGQS
LLNYSSHAQVIAMEPSNERFLRVSHYQTALVLGGTVSSGLPPDLLVSRSKVPMPLQEDAV
NVLASVLSPPLCPSALSSKLRVAVLLHGLPGCGKRTVVNYVARRLGLHVVEYSCHSLLSS
SERKTSTVLAQTFNMARRYAPTILLLRHFDVFKNLGSQDGSQGDRVGVASEIASVIRELT
EPVSNGEYSSMEEESNDNSSEDEVGKFRGHQVLLIASAESTEGLSPTIRRCFSHEIRMGS
LNDEQRSEMLSQSLQGVSQLLNTSSDEFVKELVGQTSGFLPRDLRALVADAGANLFISKD
SETEKMNSLSGDHVGDDVDQSSQLDKSNETLIPKEDFTKALDRSKKRNESALGAPKVPNV
KWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATEC
SLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGV
MDRVVSQMLAEIDGLSDSSQDLFIIGASNRPELIDPALLRPGRFDKLLYVGVNADASYRE
RVLKALTREFKLSDKDVSLYSVAKKCPSTFTGADMYALCADAWXERXERQVLNSDSEESL
PEDDPDSVVVEYVDFIKAMDQLSPSLSISELKKYEALRDQFEGRSS
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatatgttggcgcgtcatcttctcagcatcacctgatcctcttcctcctcggggc
ggagagaacgtttccgattcaaagtttgattctttcgatgactccgcattggtcggactc
tcgactcaatcgctcaagagactttcaatcaacgctggctctttggttgttatcaacaac
atcgacataagcatccaacgcattgcgcaagtcgttgtacttgatcctcctcccaagacg
acgacgttggatgatgcttctctcgttttggactctcttcatacaatgcttgtctttcct
acttacgatttgatgatgactcagcagttactatctcaagaggttgcttacttgtctccg
atgttagcctttaatctcggcttgcacgtgtcttgcctgaagtccctcgtccatcgaggg
aacgaggtcttggagaagtattttgttgctaaattcgacgaaggggaatctgcggtgggt
ggctctaagattggtttggagttggcctgtgccaggagaaaagctaattttggccagagt
ttactgaactatagttcacatgctcaggttattgcgatggaaccttctaatgagagattt
cttcgagtcagtcactaccaaaccgctcttgtacttggaggaacggtctcttctggtctt
ccaccggatttgctggtttctagatcaaaggttcctatgcctttgcaggaggacgcagta
aatgttttggcgtcggtgctttctccacctctctgcccatcagcactctcctcaaagctc
agggttgctgttttactacatggcctgcctgggtgcgggaagcgaactgttgttaactat
gtagctaggaggttgggtctgcatgtagttgaatatagctgccacagtttattatcatca
tctgaaaggaagacgtctactgttctggcacagacttttaatatggcacgaaggtatgca
ccaacgatacttctgctccgccatttcgatgttttcaaaaatctgggatctcaggatggc
tcacagggggatcgagttggcgtggcctctgagattgcatcggttattagggaactcact
gagccagtttctaatggtgaatacagttccatggaagaagaatcgaatgacaattcctct
gaagatgaagttgggaagtttaggggacaccaggtgctcttaatcgcatctgctgaaagc
actgaaggtctctctccgacaatcaggcgttgctttagccatgagatacggatgggttct
ctaaatgacgaacagagatctgagatgctgtctcagtcactccaaggtgtttctcagctc
cttaataccagctcagatgaatttgtgaaagaattagttggacagacttctggtttccta
cctcgggacttgcgtgctcttgtggctgatgctggtgccaacttattcatcagtaaagat
tccgagactgaaaagatgaattctctgtcgggtgatcatgttggagatgatgtagaccag
tcaagtcaactagataagagcaacgagacattaatacctaaggaagatttcactaaagct
ttggatcgatcaaagaagagaaatgaatcagcccttggtgctcctaaggttccaaatgtg
aaatgggatgatgttggtgggcttgaggatgtgaagacttcgattttggacacagttcag
ttacctctcctgcataaagatttattctcatctggactacgtaaacgttctggtgtactt
ctctatggtcctccaggaacagggaaaactttactggcaaaagctgtggcgacagagtgt
tccttaaatttcctgagcgtaaaaggtccagagctaatcaacatgtatattggcgagtca
gagaaaaatgttcgagatatattcgaaaaggcgagatcagcacggccgtgtgtgatcttc
tttgatgagcttgattcacttgctccagctcgaggtgcttctggtgattcaggaggagtc
atggatcgagtggtctctcagatgcttgcagagattgatggactcagcgattcttcacag
gatctgtttattataggagcaagcaacagacctgagctgattgatccagctcttctacga
cctggcagattcgacaaacttctttatgtcggagtcaacgctgatgcgtcttacagagaa
agggtcctaaaagcactaactcgggaattcaagctaagcgataaagacgtatcgctttat
tcagtagcaaagaagtgtccctctacgttcaccggggctgatatgtatgcactgtgtgcc
gatgcttggtgagaaaggtgagaaagacaggtcttgaactcagattcagaggagtctctt
ccagaagacgatccagattctgttgttgtagagtatgtggattttataaaggctatggat
cagctatcgccatcactctccataagtgaactgaagaagtacgaggcgcttcgtgaccaa
tttgaaggccgttccagctaa
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