Brassica napus (rape): 106423206
Help
Entry
106423206 CDS
T04128
Name
(RefSeq) vacuolar protein sorting-associated protein 25 isoform X1
KO
K12189
ESCRT-II complex subunit VPS25
Organism
bna
Brassica napus (rape)
Pathway
bna04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106423206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106423206
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106423206
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
106423206
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106423206
Exosomal proteins of colorectal cancer cells
106423206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ESCRT-II
WHD_CHMP7_1st
EXOC6_Sec15_N
WHD_GTF3C1
Motif
Other DBs
NCBI-GeneID:
106423206
NCBI-ProteinID:
XP_013719448
LinkDB
All DBs
Position
C1:complement(7888836..7890457)
Genome browser
AA seq
218 aa
AA seq
DB search
MSLIGKSVPFTSVSDQALRHRFSICCSWIESDRICEGQRMQKLGDFKLPQFFNYPPYFTL
QPVRDTREKQIQLWKELILDFCKSQKVFLIGVEEDFPLFSNSAIDRTLSHEARETFLSAF
VGEGRAEWLDKGHRKCLILWHRIQDWADIILKFVRENGLEDSVMTVEEIRSGTESLGTEL
EGIDRTILMRALKLLENKGKLALFKGTSADDEGVKFSV
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgattggaaagtcggttccttttacttctgtatccgatcaagctctccggcac
agattctcgatctgttgttcctggattgaatccgacaggatttgcgagggtcaaaggatg
cagaaactgggtgatttcaagcttcctcagttcttcaattatcctccatatttcactttg
cagcctgtgagggacactcgtgagaagcaaatacagctctggaaagagcttatcttggac
ttctgcaaatcccaaaaggtcttcctgatcggcgttgaagaagacttccctctcttctcc
aactctgctattgatcgaactttaagccatgaagcaagggaaactttcctctcagccttt
gttggagaagggcgtgcggagtggctagataaaggtcataggaaatgtctgattctctgg
caccggattcaagactgggcagacattattcttaaatttgtgagagagaatggtttagag
gacagtgttatgactgttgaagaaatacgttcagggactgaatcacttggaacagaactt
gaagggattgatcggacgattctaatgagagcattgaagctgctagagaacaagggcaag
cttgcattgttcaaaggaacttcagccgatgatgaaggcgtcaagttctctgtctga
DBGET
integrated database retrieval system
