Brassica napus (rape): 106423287
Help
Entry
106423287 CDS
T04128
Name
(RefSeq) myosin-15-like isoform X1
KO
K10357
myosin V
Organism
bna
Brassica napus (rape)
Pathway
bna04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
106423287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106423287
04131 Membrane trafficking [BR:
bna04131
]
106423287
03029 Mitochondrial biogenesis [BR:
bna03029
]
106423287
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bna04812
]
106423287
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
106423287
mRNA cycle factors
P-body specific factors
106423287
Membrane trafficking [BR:
bna04131
]
Others
Actin-binding proteins
Myosins
106423287
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
106423287
Cytoskeleton proteins [BR:
bna04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
106423287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Zeta_toxin
TRPM_tetra
Tropomyosin
TSC22
ABC_tran
Motif
Other DBs
NCBI-GeneID:
106423287
NCBI-ProteinID:
XP_013719524
LinkDB
All DBs
Position
A3:complement(30030972..30043413)
Genome browser
AA seq
1522 aa
AA seq
DB search
MESNLRRGDKVWVEDKDSAWAAGEVLDSPGNKVHVETSTGKQVFVCSEKVFRRDPDEEDR
NGVDDMTKLTYLHEAGVLYNLQRRYALNDIYTYTGSILIAVNPFKKLPHLYNGYMMEQYK
GAPFGELSPHVFAVSEVAYRAMIDDRRSQSILVSGESGAGKTETTKLIMQYLTYVGGRAA
EDNRSVEQQVLESNPLLEAFGNAKTVRNDNSSRFGKFVEIQFDANGRISGAAIRTYLLER
SRVVRITDPERNYHCFYQLCASGSDAEKYKLSNPHQFHYLNQSKTYDLEGVSNAEEYKNT
RRAMDIVGISHDEQESIFRTLAAILHLGNVEFSSGKEHDSSVVKDQESRNHLQMAADLFR
CDANLLLASLCTRSILTREGTIIKALDCNAAVTSRDALAKTVYARLFDWLVDKINRSVGQ
DPNSHFQIGVLDIYGFECFKSNSFEQFCINFANEKLQLHFNEHVFKMEQDEYRKEEINWS
FIEFIDNQDVVDLIEKKPIGVIALLDEACMFPRSTHESFSMKLFQNCKSHPRLEKTKFSE
TDFTLSHYAGKVTYQTETFLDKNRDYTIVEHCNLLSSSRCPFVAGLFASAPEESARSSYK
FSSVSSRFKQQLQALMETLSKTEPHYVRCVKPNTLNRPQKFENLSVLHQLRCGGVLEAVR
ISLAGYPTRRYYSDFVDRFGLLAPELMDESNDEQALTEKILRKLGLGNYQLGRTKVFLRA
GQIGILDSRRTEVLDASARLIQRRLRTFVTHQNFIAARACAISIQAYCRGCLSRNAYVAR
RNEAAAVLVQKHARRWLSRCAYVKLVSAASVIQSCIRADSARLKFAHQKEHRAASLIQAR
WRVHKFHTEFRHRQSSIIAIQCCWRQKLAKREFRKLKRAANEAGALRLAKTKLEKRLEDL
EWRLQLEKRLRTSGEEAKSGEISKLQKTLESFRLKLDAARLATINECNKNAVLQKQLDIS
MKEKAAVERELKGMVELEKDNTSLKNSMNSLEKMNLSLEKELLSAKTDCNNTLQKLKEAD
NRCSELQTSVQSLEEKLSHLENENHVLRQKTLRISPERIGRMLGESPQQKHSSDVVPAQI
DRTSVFETPTPSKRIMPFSRSLSESRRPKFTAERNVDIHELLSRCIKENLGFNDDKPLAA
CVIYKCLLHWHAFESESTAVFNIIIEGINEALKVGDENSVLPYWLSNTSALLCLLQRNLR
TNSFLNASVQRSGRAASGVKSPFKVNGPDDGVPHIEARYPAILFKQHLTACVEKIYGLIR
DNLKKELAPLLGLCIQAPKALRGTAGKSSRSPSDVPQRSPSSQWENILKFLDSLMSRLRE
NHVPSFFIRKLVTQVFSFINLSLFNSLLLRRECCTFSNGEYVKSGITELEKWISGVKEEF
SGTSWHELSFIRQAVGFLVIHQKRRKSLDEISQDLCPALTIRQIYRISTLYWDDKYGTQS
VSSEVVSQMRVLVDKDSSQKLTSNSFLLDDDMSIPFSAEDIDKAIPVLDPSEIEPPKFVS
EYTCAQSLVKKPSATSVSKQIL
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgaatctgcggaggggcgacaaggtttgggtggaggataaggattcagcttgg
gctgccggtgaagtgctcgattctccgggaaacaaggtccacgtcgaaacttccaccgga
aaacaggttttcgtctgctcggagaaggtgtttcgtagggatcccgacgaggaggatcgt
aatggagtggatgatatgactaagctgacgtacttgcacgaggctggtgtgctttacaat
ctacagaggagatacgctctcaatgatatctacacatacactggaagcattctgatcgct
gttaatccgtttaaaaagcttccacatctctataatgggtacatgatggagcagtacaag
ggagcaccattcggtgagctcagtcctcatgtttttgctgtttctgaagttgcatacaga
gcgatgattgacgacaggcgaagtcagtctatactcgttagcggtgaaagtggagctgga
aaaactgagacaactaaactaatcatgcagtatcttacatatgttgggggacgtgctgct
gaagataatagaagtgttgagcagcaagtccttgaatcaaatcctctcttggaagcattt
gggaatgcgaaaacagttagaaacgataattccagccgttttggcaagtttgtggaaatc
caatttgacgcaaatggtagaatatctggtgctgcaatcagaacctatcttctggagaga
tcacgtgtagtccggataacagaccctgagaggaactatcactgtttctaccagctttgc
gcttctgggagtgacgctgaaaaatacaaactaagcaatccacatcaatttcattatctc
aatcaaagcaaaacctatgacctggagggagtaagcaacgcagaagagtataagaataca
aggagggccatggatattgtgggcataagtcacgatgagcaggaatcgatattccgcacg
cttgctgccattctgcatcttggaaatgttgagttttcctccggaaaagagcatgattct
tctgtagtaaaggatcaggaatctagaaatcatctgcagatggctgctgatcttttcagg
tgtgatgcaaatcttttactggcttctctctgcacacgttcaattctgacccgtgaaggt
accataatcaaagcacttgactgtaatgctgctgttactagccgggatgcactagcgaag
acagtttacgcccgtctgtttgactggttggttgataagattaataggtctgttgggcaa
gatccaaactcccattttcaaataggagtcctggacatttatggctttgaatgctttaag
agtaacagttttgaacaattttgcatcaattttgcaaatgaaaagcttcagctgcatttc
aatgagcatgtatttaagatggagcaggatgagtacagaaaagaagagattaattggagt
tttattgagtttattgacaaccaggatgttgtggaccttatagagaagaaacctattggg
gtaattgcactcttggatgaagcttgcatgtttcctagatcaacacatgagtcattttca
atgaagctgttccagaactgtaaatctcatccaagattggagaagacaaaattttcagag
acggactttactctctctcattatgctggcaaggttacgtaccagactgaaacctttctg
gataaaaatcgtgattatactatagttgagcactgcaatctgttatcttcctcacgatgc
ccctttgttgctggactttttgcctccgcgccagaggagtctgccaggtcttcttacaaa
ttttcttctgtgtcttccagatttaagcaacaacttcaagccctcatggaaactctcagc
aaaacggagcctcactatgttcgttgtgtgaagccaaacacactcaacagacctcaaaag
tttgagaatcttagtgttttacatcaacttcgttgtgggggagtactggaagctgttcgg
attagtcttgcagggtatcccacacgaaggtattattcagactttgtggatcggtttggt
ctgttagccccagaactcatggatgagagcaatgatgagcaggcgcttaccgagaaaatc
ttgcggaagttgggtctggggaattatcagttaggaaggacaaaagtgttccttagagct
ggtcaaattggcattttggactctaggcggactgaagttcttgatgcttctgcaagactc
attcagcgaagactaagaacatttgttacgcatcaaaacttcatcgctgcccgggcttgt
gcaatttctatccaagcatactgtagagggtgcctgtcccgaaatgcctatgtcgccaga
aggaatgaagcggcagcagtattggtacaaaagcatgcgcgcaggtggctgtcaagatgt
gcatatgtgaaacttgtatcggctgcatcagtaatacagtcttgcatccgtgctgactca
gctcgtttaaagtttgctcatcagaaagagcacagagctgcttctctgattcaggctcgt
tggagagtgcataagtttcacacagaattcaggcaccgccaatcttctattattgctata
caatgttgttggcggcagaagcttgcgaagagagagtttagaaaacttaaacgggctgct
aatgaagcaggtgctttgcgattagcaaaaactaaacttgagaagcgattagaagatctt
gaatggcggttgcagcttgagaaacgattgcgaaccagtggtgaggaggccaagtcaggt
gaaatatccaagcttcagaaaacattggaatccttccgcctcaaactagatgcagctagg
ctggctaccattaatgagtgcaataagaatgcagtacttcaaaagcaactagacatatcc
atgaaggagaaagctgctgttgaaagagaacttaagggaatggttgaactggaaaaagat
aacacttctttgaagaattcgatgaattccttggaaaagatgaatctgtctctggagaag
gagcttctcagtgctaaaacggattgcaataatacactacagaagttgaaggaagctgat
aatagatgttctgaactccagacaagtgttcaaagcctcgaggagaaactctctcacctg
gagaacgagaaccatgtcttgaggcagaagactttaaggatatccccagagagaatagga
cggatgcttggtgaatctcctcaacagaaacactctagtgatgttgtaccagctcagatt
gacaggacatctgttttcgagacacccacaccttcaaaacgcatcatgccattttcacgt
agcctgtcagagtcacgtcgacccaaattcactgcagaaagaaacgtggatatccacgaa
ttgctctccagatgtatcaaggaaaatttgggattcaatgatgataagcctttggctgct
tgtgtaatatacaaatgtcttctgcactggcacgcctttgaatctgagagcacagccgta
tttaacatcattatcgagggaattaatgaagcccttaaggttggagatgaaaacagtgta
ttaccatattggctttcaaacacttcagcacttctatgcctcttgcagagaaatctacgg
acaaatagttttctaaatgctagtgttcagcgttctgggagggcggcatctggagtaaag
tctccttttaaagttaatggacctgacgatggcgttccgcatatagaagcaagatatcca
gcaatattgtttaaacagcatctgacagcatgcgtggagaagatttatggtctaattcgt
gataatttgaagaaagagttagcaccgcttcttggattatgcattcaggcacccaaggct
ttacgaggaactgctggaaaatcctctagatcaccaagcgatgtgccgcagcgatcacca
agtagtcaatgggaaaatatacttaaattcctggattctcttatgtcccgcctacgagaa
aaccatgtaccctcgttcttcatacgcaagcttgtgactcaggttttctcatttatcaat
ctctcacttttcaacagtctcctccttcgacgtgaatgttgcacattttcaaatggggaa
tatgtgaaatctgggattacagaattggagaagtggatatccggtgtcaaggaggagttt
tcaggaacatcttggcacgagttaagtttcattagacaagctgttggattcttggttata
caccagaaaagaagaaaatcgctggatgaaatcagtcaggatctatgcccggcattgaca
ataaggcaaatatatcgaataagtacgctgtactgggatgataaatatggaactcaaagt
gtctcaagcgaggtggtttctcaaatgagggtacttgttgacaaggatagcagccaaaaa
ctaacatcgaattcattcttgctggatgatgatatgagcattcctttctcggcagaagat
atagataaggctattccagttttagacccatcagagatagaaccaccaaagtttgtatca
gaatatacttgtgcacagtcccttgtgaagaaaccctccgcaacttcagtctcgaagcag
atcctttga
DBGET
integrated database retrieval system
