Brassica napus (rape): 106423513
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Entry
106423513 CDS
T04128
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106423513
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106423513
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106423513
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106423513
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106423513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
Motif
Other DBs
NCBI-GeneID:
106423513
NCBI-ProteinID:
XP_013719739
LinkDB
All DBs
Position
A5:24011598..24015073
Genome browser
AA seq
686 aa
AA seq
DB search
MGYKLQMSWMPSLLSQKRRNGPPLGLRNLGNTCYLNSVLQCLTYTPPLANFCLSHKHSSH
CDSFVDGERKRDCPFCIVEKRIARSLSVDHAIDAPNKISSCLKIFAEHFKFGRQEDAHEF
LRYVIDACHNTSLRLKKLRTKGGGGPESVNGSSSSSTEVKEIFGGAMQSQVKCLPCGAES
NKADEIMDISLEISNSSSVKESLQKFFQPEILDGNNKYKCESCKKLVTARKQMSVLQAPN
ILVIQLKRFEGIYGGKIDKPITFGEILFLSTFMSKSSKDPQPEYKLFGIIVHSGYSPESG
HYYAYVKDSLNRWFCCNDASVTHSTLQEVLSEKAYILFFSRINQRPASAKNLVTTSNGTT
SHEVNGSETPRPKKFIGPLNNVSMQQPRAEQSFKKDNNNLASSKPHQFIRPLKDANMKPR
EEQPFHKKNADSPQVEKAPLKPHAKISISVNLGAKRVSPTVNGRLSFDQDQDLAPEADKE
NIGSGSAKRVYTCSEKKFGTENGGNGVKENGSAQASSSSSNNNEVSLHPHERSNGSRNGG
DHHHKDSLYSCKSNGSQNGTDQEEIEKDGVSKPQPKALESSTNGDERCIFLRKDKSSRDQ
LEAIKESLQEDVSSYLRSCGWYDEVHKSMRAKKRLLGELSGGDGEDGNDLKRRLIADVES
SLSQIPDELKADLVNCLSRIGKKKYS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggatataagctgcagatgagctggatgccgagtctactcagtcagaagcgacgtaac
ggtccgcctctagggttacggaacctcggcaacacgtgctacctcaatagcgtcctccaa
tgcctcacctacactcctcctctcgccaatttttgcctcagtcacaaacactcctctcac
tgtgattcattcgttgatggcgagaggaaacgagattgtcctttctgcatagttgagaaa
cggatagcgaggtctctcagcgtcgatcacgccatcgatgcgcctaacaagatctcgagc
tgtctcaagattttcgccgagcattttaagtttgggcgtcaagaggacgctcatgagttt
ttgaggtatgtgatcgatgcgtgccacaatacgtctcttcgtctgaagaagctgaggacg
aagggcggcggcggccctgagtctgttaacgggagtagtagtagtagtactgaggtgaag
gagattttcggtggtgctatgcagagccaggtgaagtgtttgccgtgtggcgcggagtct
aataaagctgatgagattatggatatcagtcttgagatttcgaatagtagctcggtgaag
gagtcgttgcagaagttctttcagcctgagattttggatgggaacaataagtacaaatgc
gagagttgtaagaagttggtgacggcgaggaagcaaatgtcggtactccaagcacctaat
atacttgtcatccaattgaaaaggtttgagggtatttatggtgggaagattgataagccc
attacatttggtgagattctgtttctctccacattcatgagtaaatcaagcaaggatcct
caaccagaatacaagctttttgggataattgtgcattctggatattctcctgaatctgga
cactattatgcatatgttaaggattctttgaaccgatggttttgctgcaacgatgcgtct
gtcacacactccaccttgcaagaggttttgtcagagaaagcctacatactctttttcagc
cgtatcaaccaaaggccggcttctgctaaaaatttggtgacaacatccaacgggactaca
tctcacgaagttaatggctctgagacaccaaggcccaagaagtttattggtccccttaat
aatgtcagcatgcaacaaccacgagctgagcagtccttcaagaaggataataataacctg
gcttcttcaaagccccatcagtttattcgtccccttaaagatgctaacatgaaaccacga
gaagagcagcctttccacaagaagaacgctgattctccccaagttgaaaaggctcctctc
aagccacatgcaaagatcagtatatctgtcaaccttggtgctaaaagggtatctcctact
gtcaatggcagactttctttcgaccaagatcaggacttagctccagaagcggacaaagag
aatattggatctggttcggcaaagagggtatacacttgttcggagaaaaagtttggtact
gaaaatggtggtaatggagttaaagaaaacggcagtgcacaagctagtagtagtagtagt
aacaataatgaagtgagcttacatccacatgagcgtagtaacggctcacgcaatgggggt
gatcatcatcacaaagatagcttatattcatgcaagagtaatggttcacaaaatggaact
gatcaggaggaaattgagaaggacggtgttagcaaaccccaacccaaagccttggagtct
tcaacaaatggagatgagcgctgcatttttcttaggaaagacaaatcatctcgtgatcaa
cttgaagcaatcaaagagagcctgcaggaagacgtgtcatcatatttgcggtcatgcgga
tggtatgatgaagtacacaaatcgatgcgcgccaagaagagattgcttggagagctatca
gggggagatggtgaagatggtaacgacttaaagaggaggttgatagcagatgtagagtca
agtttatctcagatcccagatgagttgaaagcagatctggtaaactgtctctcgcgaatt
ggcaagaagaaatactcatga
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