Brassica napus (rape): 106423538
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Entry
106423538 CDS
T04128
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
bna
Brassica napus (rape)
Pathway
bna00541
Biosynthesis of various nucleotide sugars
bna01100
Metabolic pathways
bna01250
Biosynthesis of nucleotide sugars
Module
bna_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
106423538
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
106423538
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
DUF3269
Motif
Other DBs
NCBI-GeneID:
106423538
NCBI-ProteinID:
XP_013719762
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MATYKPKNILITGAAGFIASHVANRLVRTYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFK
FVKGDIASADLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH
KGEVNHVYNIGTTKERRVIDVANDISKLFGINPDSTIQFVENRPFNDQRYFLDDQKLKKL
GWAERTTWEEGLKKTMEWYTANPEWWGDVSGALLPHPRMLMMPGDRLCDSGDERKDADGN
QTFTVVTPPKTGGSGDNKTSFKFLIYGKTGWLGGLLGKLCEKQGIAYEYGKGRLEDRASL
VADIRRVKPTHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENGLLMMNFA
TGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISS
DLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLKGIWNFTNPGVVSHNEI
LEMYKSYIEPGFKWSNFTLEEQAKVIVAPRSNNEMDGAKLSKEFPELLSIKDSLIKYVFE
PNKRT
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggctacatataagcccaagaacatcctcatcaccggagcggcgggattcatcgcctcc
cacgtggcaaacaggctagtccgcacctaccccgactacaagatcgtggtcctcgacaag
ctcgactactgctccaacctcaagaacctcaacccttccaaatcctcccccaacttcaag
ttcgtcaagggcgacatcgccagcgccgacctcgtcaactaccttctcatcaccgagaac
atcgacaccatcatgcacttcgcagctcaaacccatgttgataactccttcggtaacagc
tttgagttcaccaagaacaatatctacgggacccatgtgcttttggaggcttgtaaagtc
actgggcagatcaggaggtttattcatgtgagtactgatgaggtttatggagagactgat
gaggatgcttccgtggggaatcatgaagcttctcagttgcttccgactaatccgtattct
gctactaaggcgggtgctgagatgcttgtgatggcgtatgggagatcttatgggttgccg
gtgataactactcgtgggaataatgtttatggtccgaatcagtttcctgagaagttgatt
cctaagtttattctgttggctatgagtgggaagccgcttccgattcacggagatgggtct
aatgtgaggagttatttatactgtgaagatgttgctgaggcgtttgaggttgttttgcac
aaaggggaggttaaccatgtgtataatattgggacgacgaaagagaggagagtgattgat
gtggctaatgatatctccaagctctttgggattaaccctgactccaccattcagtttgtg
gagaaccggccttttaatgaccagaggtacttcctcgatgaccagaagctgaagaaactg
gggtgggcggagcgaaccacttgggaggaagggttgaagaagactatggagtggtacact
gcgaaccctgagtggtggggagatgtttctggagctctgcttcctcatccaaggatgctg
atgatgcctggtgatagactctgtgatagtggtgacgagcgcaaggatgctgatggtaat
cagacgttcacggtggttactccccccaagactggtggttctggagacaacaaaacgtcc
tttaagttcctcatctatggtaaaactgggtggctcggtggtcttctaggaaagctctgt
gagaagcaagggattgcgtacgagtatgggaaagggaggctagaggacagagcttctctt
gtggcggatattcgtagagtcaaacctactcatgtcttcaatgcagccggtttaacgggc
agacccaatgttgactggtgtgagtctcacaaaacagagaccatccgagtgaacgttgct
ggtactttgactctggcagatgtttgcagagagaatggtctgttgatgatgaactttgcc
accggttgtatatttgagtatgacgctgcacatccagaaggttcagggattggcttcaag
gaagaagacaaaccgaacttcaccggttccttctactcaaaaacaaaggcaatggtggaa
gagcttctaagagaattcgacaacgtatgcaccttgagagtgcgtatgccaatctcatcc
gacctgaacaacccacgaaacttcatcaccaagatctctcgttacaacaaagtggtgaac
atcccgaacagcatgaccatactagacgaactcttaccaatctcaatcgagatggcgaag
aggaaccttaagggaatatggaacttcaccaatccaggagtggtgagccacaacgagata
ctagagatgtacaagagctacatcgagcctggtttcaaatggtccaacttcaccttggaa
gaacaggctaaggtcattgttgcgccacggagcaacaacgagatggatggtgctaagctc
agcaaggagtttccagagttgctttccatcaaagattcgttgatcaaatacgtcttcgaa
cccaacaagagaacgtaa
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