Brassica napus (rape): 106424019
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Entry
106424019 CDS
T04128
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106424019
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106424019
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106424019
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GFIT
Motif
Pfam:
Ion_trans
DUF6525
Motif
Other DBs
NCBI-GeneID:
106424019
NCBI-ProteinID:
XP_013720212
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Position
C1:complement(22513606..22521521)
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AA seq
802 aa
AA seq
DB search
MRKQNHDSVIYMTRCLLPYLFPIEQTLVSTSTFPCLEMVSPNKNDKIHMLPISDASSSSS
QTRVFTSRTRSVPLSNPTDETGNSNAVTLGYAGSLPSQRPPLVPMTGPLSSSTRRPEPLF
PRPAPPPTRRSSGYFGDLEEVNYSSDNDELLKHAHRLRSGKLGMCNDPYCTTCPSNYNPK
ASRLPNPTVSASTFHNALYDDARSWARRFASSVNRCLPGIMNPHSKVVQIWTKFFAVSSL
LAIFIDPLFFFIILVQKNNKCIVIDWPIATAFVIFRTLTDVIFFANMLLQFRLAYVARES
TVVGAGQLVDRPKKIALHYFRGYFIVDLIIVMPFPQVLVLSVIPAQLAISGTNYAKNLLR
AGILVQYIPKLYRLLPLLAGQTPTGLIFESAWANFVINLLTFMLAGHVVGSCWYLFGLQR
VNQCLRNACGHSGRECRGLIDCGHGNSNISASLRAIWRNSASANACFQEDGFSYGIYLKM
VNLTTHTSLLTRYSYSLLWGFQQISTLAGNQVPSYFFPEVVFTMGIIGLGLLLFALLIGN
MQNFLQSLGKRSLEMTLRRRDVEQWMSHRRLPEGIRKRVREAERFNWAATRGVNEELLFE
NMPDDLQGDIRRHLFIFLKKVRIFSLMDESILDSIRERLRQRTYISGSTVLHRWGLVEKI
AFIVRGEMESIGEDGSVLPLSEGDVCGEELLTWCLERSAVNLDGRMLSKGLLSSRNVKCV
TNVEAFSLSAADLEDVTSLFSRFLRSHRVQGAIRYESPYCRLRAATQIQVAWRYRKRQLR
KLSTAQKKQYSLELIKKDMAKT
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacaaaaccatgactcggtcatatatatgactcgttgtctccttccttattta
ttcccgattgagcaaactctagtctctacttcaacttttccgtgtctagaaatggtttcc
ccaaacaaaaacgataagattcacatgcttccgatttcagacgcatcgtcatcttcatct
cagactagggttttcacttccaggactcgtagcgttcctctctcaaaccctactgacgaa
actggcaactcgaatgctgtgactttaggctacgcaggttctcttccgagccaacgtcct
cctttagtcccaatgactggccctctttcctcttctactcgtagacctgaacctctcttc
cctcgtcctgctcctccccctactcgaagatcttctggctattttggtgacctggaagag
gtaaactactcctcagacaacgatgagttattgaaacacgcacatcgcctgagatctgga
aagctggggatgtgtaacgatccttactgtaccacttgcccttctaactataaccccaaa
gcatcccggcttcccaatccaactgtttctgcttccacgttccataatgccttgtatgat
gatgctagaagttgggctaggcgatttgcttcttctgttaatagatgcttacctggaatc
atgaatcctcattccaaagtcgttcaaatatggactaagttctttgccgtctcaagcttg
ttagccatttttatagaccccctcttcttcttcatcatattagtccaaaagaacaacaaa
tgcatagtgattgattggccgatagctaccgcatttgttatttttagaactctgacggat
gttatattctttgctaacatgctgcttcagttccgactggcatatgtagctcgtgagtct
acggtagttggtgctggccagttggttgatcgtcccaaaaaaattgctctccattacttt
cgaggatattttatcgtagacctgatcatagtgatgccatttccacaggtattggtacta
tcggtaataccagcacagttagccatatccgggacaaactatgcgaaaaaccttttacgt
gctggaattcttgtccaatacattccaaagctatatagacttctaccactgcttgctgga
caaacaccaacaggcctcatatttgagtcagcttgggctaactttgttattaatcttctc
acctttatgcttgctggacatgttgtcggctcttgctggtatcttttcggtttgcagaga
gttaaccaatgccttcgaaatgcttgtggtcattctgggcgtgaatgtagaggtcttatt
gattgtggccatggaaatagtaatatatcagcatccctacgagctatctggagaaatagt
gcgagtgcaaatgcttgtttccaagaagatgggttttcttacggaatatatttgaaaatg
gtcaatcttacaactcatactagtctcttgacaagatatagttactctttgctatgggga
tttcagcaaattagcacgcttgctggaaaccaagtcccaagctactttttccctgaggtc
gtttttactatgggtatcatcggacttggacttttgcttttcgcgcttcttattggtaat
atgcaaaacttccttcagtctctcggtaaaaggagcttggaaatgacgctaagacggcgt
gatgtagagcagtggatgagccatagacggttgccagaagggataagaaagagggtgcga
gaggcagagcgtttcaattgggctgctaccagaggagttaacgaagagttgctctttgag
aatatgcctgatgaccttcaaggagatataagaagacacctcttcatatttctcaagaaa
gtaagaatattttcgttgatggatgaatcaattttagactcaatacgtgagaggctgaga
cagaggacatacataagtggtagcacagtcttgcaccgctggggtctggtggagaaaata
gctttcatagtgagaggtgagatggagagcattggagaagacggttctgttcttcctcta
tcagaaggagacgtttgtggtgaagaacttctcacttggtgccttgaacgctctgctgta
aacctcgatgggaggatgctttccaagggattgcttagcagcagaaatgttaagtgtgtg
acaaacgtggaggcgttttcgctgagtgcagcagaccttgaggatgtaacgagcttgttc
tcgagattcttaaggagccatcgagtccaaggagccataagatacgagtctccttattgt
aggctacgagcagctacgcagattcaagtggcttggagatacagaaagagacagctccgg
aagttaagcactgctcaaaagaaacaatattcgttggagttaatcaaaaaagacatggcg
aaaacatag
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