Brassica napus (rape): 106424184
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Entry
106424184 CDS
T04128
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1 isoform X2
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bna01001
]
106424184
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106424184
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106424184
Protein kinases [BR:
bna01001
]
Serine/threonine kinases: Other
Other
106424184
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106424184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_2nd
LisH
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_EML_2
WDR90_beta-prop_4th
LisH_PAC1
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
106424184
NCBI-ProteinID:
XP_013720379
LinkDB
All DBs
Position
A8:complement(14477751..14484771)
Genome browser
AA seq
1893 aa
AA seq
DB search
MDGQGNEPEVPNPTAENEQLALAAETETETENSNGGGDNPKEEEGLIEKAQKLMEHITNG
ANNPNPTVLHALSHLLESQESLFIKENGFYSNGRGSHISGKLCKLIKENDEFFELISSTF
LSENTYSTAVKAASARLLMNWLLTWTHPYIFDDAVTENFKKWVLEEAVKFPGEHSGSSEA
SDSEMLKTYSTGLLAHSLTSRGQLVEDVLTSGLSAKLMHYLRVRVIGEASTSRRDALHTT
EAKHVSLKTKEDGRSRVRRVVDTAEGDHVLEADAGRETDVLSEGELEIDGRDRCNVPAVF
DGKMKPGDGNTGRDDPSRNRLSRSKSRARGKVNEGATDTDSLLASPTSGRLGVRDRDQSK
NLDVRNAEDGTKWLGKMKSGIMEIEREKNDECFQDCVIGTKNITDIVKRAVGAAETEARA
AHAPDEAVKAAGDAAAELVKTTALEEFKSSGSEEAAVAAARRAATTVIDAAEVSRNATCV
TSDQTAGTSSVETDATVDVGEVSLPDIESLAQLQEKYCIQCLEILGEYVEVLGPVLHEKG
VDVCITLLERTSQLGDSFTLSPLLPDVMKLICALAAHRKFAAMFVDRGGLQKLLAVPRVT
ETFYGLSSCLYTIGSLQGIMERVCALPSDLIHQVVKLAIELLDCSQDQARKNSALFFAAA
FVFRAILDAFDAHNSLQKLLAILKDAASVRTGANSDRSAPEVMTSSEKQMAFHTCFALRQ
YFRAHLLLLVESIRPSRSGRGGVPKVPNIRAAHKPLDISNEAVDAVFLQLQKDRKLGPTF
VRTQWPAVNNFLTSSGHVTMLELCQTPPVDRYLHDLLQYAFGVLHIVTSIPDGRKAIVTA
ALSNNRAGIAVILDATNISNSIVDPEIIQPALNVLINLVCPPPSLSNKPLLAQNHQPVPD
QATARPSTDVPADNAPPTPVAPASSGLVGDRRIFLGAGTGSAGLAAKLEQVYRQAREAVR
GNDGIKILLKLLQPRIYVNPPATPDCLRALACRVLLGLARDDTIAQILTKLEVGRSLSEL
IRDSGGQSSGTDQVRWQAELTQVALELIGIVTNSGHANTLTASDAATPTLRRIERAAIAA
ATPITYDSKELLLLIHEHLQASGLGETASALLKEAQLNPLPSLAPPSSIAYSATQEMSAP
VAQVQWPSGRASGGFFNSKPEVCAHDEDPNSKCNAALSAKKKHLASSTQETSTPVAQQQW
PSGRTNCGFFPSKPKVNAHEEDPSSRGNAAPSAKKKQLAFSPSFGSQSRKQSLCQDAQPQ
STQRINSSSNSDPACGDTSEAVAEKNDLDADAQFKTPTFPRKRKLSELRETEMSTSSKRI
NLGELGPRTPACPTSASLRRNSTIAEASGFQTPASALDVNQSGSSRLGQMTPASQLRLPS
DPQPSERLSLDSLVVQYLKHQHRQCRAPITTLPPVSLLHPHVCPEPKRLLEAPLNITDRL
GTRELQSYYSGVHGNRRDRQFVFSRFKSWRSYRDETALFTSISLLGGTNHLAVGSHAGEI
KIFDASSGNMLESVSGHQAPVTLVQSYVSGDTQLLLSSSYSDVQLWDASDITVGSKHSFD
GCKAAKFSNSGSLIAALSSEGPTKDVLLYNVETGSLSEKFTDPDTSSRTSPYTLVHFNPC
DSLILWNGHLWDRRVPNSCKRFDQFTDYGGGGFHPSRNEVIINSEVWDLRNMNTRLIRSV
PSLDQTAITFNSRGDVIYAMLRRNIEDVMSAVNTRRAKHPLFAAFRTLDAVNYSDIATIP
VDRCLLDFATEPTDSFLGLITMEDQDDMFSSARMYEIGRRRPTDDDSDPDDDGETEDEDE
DDEDDEDDLDRILGLAGDDSDSGDDDMSSDDNEDNSASDFDDDDGGMFFDGGIMEIVSEG
DDEDDNGDSDGEDSDDDGDSISSGEEDFLNRIH
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcaagggaacgaacccgaggtccccaatcccacggctgagaatgaacaattg
gctctcgcggcggagacggagacggagacggagaattcaaacggcggaggagataaccct
aaagaagaagaagggcttatagagaaggcgcagaagctcatggaacatatcactaacggt
gctaataaccccaaccctactgtcctccacgctcttagccacctcctcgaatctcaggag
tctctgtttataaaggagaatggattctactctaatggtcgtggtagtcatatcagtgga
aagctatgtaaactcatcaaagagaatgatgagttctttgagttgatttcgtcaactttt
ctatctgagaatacttactcaacagctgtaaaggcagcctccgcaaggctgctaatgaat
tggttgcttacttggacgcatccttatattttcgatgatgctgttacggaaaactttaaa
aagtgggtcttggaagaggctgttaagtttcctggtgaacactctggtagcagtgaggcc
tcagattctgagatgttgaagacttattctactggacttctcgctcactctctgacgagt
cgtggtcaattagttgaagacgtcttgacgtcaggactatctgctaagcttatgcattat
ctccgagtacgtgttattggagaggcaagcacgagccgtagagatgcccttcatacaact
gaggctaagcatgtgtcattaaaaacaaaagaagatggtagaagtagggtgcgaagggtt
gtggatacagctgaaggtgaccatgtgcttgaggcagacgccggtagagagactgatgta
ctgtctgaaggagaactcgaaatcgatggtagagatagatgtaatgttcctgctgttttt
gacggtaaaatgaagcctggagatggcaataccggaagagatgacccttcaagaaataga
ctgagccgatcaaaatctagggcgagaggaaaggtgaacgaaggtgctactgatacagac
agtctcttggcatctcctacatcaggtcgtcttggtgtcagagatagggatcaatcaaaa
aatttagatgtcagaaatgcagaagatgggactaaatggctggggaaaatgaagtctggt
ataatggagattgaaagagagaagaatgatgagtgctttcaagattgcgtgattggaacc
aaaaacataactgatatagtaaagagagcggttggagctgctgaaaccgaagctagagct
gcccatgctcctgatgaagcagttaaagcagccggtgatgctgcagcagagcttgttaaa
actactgctttggaggaatttaagtcctctggcagtgaagaagctgccgtggctgctgct
cgtcgagcagctactacagtcatagatgccgctgaggtttcaagaaatgccacctgtgtt
acatctgatcagactgcgggtacgagtagtgtggaaactgacgcaactgtggatgttgga
gaagtttcacttccagatattgaatcgttggctcagttacaggaaaagtattgcatccag
tgcctcgagatactgggagaatatgttgaggttctcgggcctgtcctccatgaaaaaggt
gttgatgtctgcattacgctactggagcgtacgtcccaacttggtgatagcttcacactg
tcgcctttgttacctgatgtaatgaagttaatttgcgctttggctgcacaccgaaagttt
gctgcaatgtttgttgaccggggtggcttgcagaagttacttgctgtgccaagggttact
gagaccttttatggtctctcatcttgcttatacaccataggctctcttcagggtattatg
gagcgtgtctgtgcacttccatcggatctcatacatcaagtggttaaattagctatcgaa
cttctagactgttcccaggatcaagccagaaaaaattcagccttattctttgctgctgct
tttgtctttagagccattttagatgcatttgatgctcataatagtttgcagaaactcctt
gcaattctcaaagatgcagcctcagttagaactggtgctaattctgaccgatcagcccct
gaagtcatgacgtcctcagagaaacagatggcttttcacacctgttttgctttgcgtcag
tattttagagctcatctacttttgcttgtggaatccattcgcccaagcagaagtggccga
ggtggtgtgccaaaagttcctaatattagggcagcccataagccccttgacattagcaat
gaagctgtggatgccgtattccttcagttacagaaggataggaagttgggtccgaccttt
gtgagaactcagtggcctgctgtcaataactttttgacctcctctggacatgttaccatg
ttggaactatgccagactccaccagtagaccgttatctccatgatctacttcagtatgct
tttggtgttcttcacatagttacatcaatacctgatggccgcaaagcaattgtgactgcc
gcactcagcaacaatcgtgctggcattgctgtcattctggatgccactaatatttccaac
agcatagtggaccctgagatcatacagcctgcactaaatgtcctaatcaatctggtctgc
ccaccaccatcattaagcaataagccgcttcttgcccaaaatcatcaacctgttcccgac
caagccactgcccgtccttcaaccgatgttcctgcagataatgctccgccaactcctgtt
gcaccagcgtcttcaggtttggtcggggatcgaagaattttcttaggagcaggaaccggt
tctgctggccttgctgctaagttggagcaggtttatcgtcaagcacgtgaggctgttcgt
gggaatgatggtataaaaattctcttaaaacttcttcagcccagaatatatgtgaacccc
cctgctaccccagattgcctacgagcgctggcctgcagggtacttcttggtctcgctaga
gatgatacaattgcacaaatactgactaaacttgaggttggtaggagtttatcagaacta
attcgggactcaggtggtcagtcaagtggaacagatcaggtcaggtggcaggctgaactt
acgcaggtggcccttgagctgatagggatagtaacaaattcagggcatgcgaatacacta
acagccagtgatgctgctactccaacactgaggcgcattgaaagagctgccattgccgca
gcaacacctataacatatgattctaaggagcttttgctccttatccatgagcacctccag
gcatcaggtcttggtgaaactgcttcagcactgttgaaagaggctcagttgaatcctcta
ccttccttggctcccccttcttctattgcatattccgctacacaggagatgtctgcaccg
gtagctcaggtgcagtggccttctggtcgtgctagtggtggatttttcaacagcaaacct
gaagtctgtgcacatgacgaagatcctaactctaaatgtaatgcggctctatctgccaag
aagaaacatctggcttcctccacacaggagacgtccacgccagtagcacagcaacaatgg
ccctctggtcgtactaactgtggttttttccccagcaaacccaaagtcaatgctcacgaa
gaagatcctagttcgagaggtaatgcagctccatctgcaaagaagaaacagttggctttc
tctcccagctttggttcgcagtcacgaaagcaatctttgtgccaggacgctcaacctcag
tctacgcagagaataaacagtagttcaaattcagatcctgcttgtggagatacatcagaa
gctgttgcagagaagaacgaccttgatgccgatgctcaatttaagaccccaacttttccg
agaaaacggaaattgtctgagctaagagaaacagagatgtcaacctcaagtaaaagaatc
aatttgggcgagctaggaccacgaactccagcttgtccaacatcggcttccttacgtagg
aattcaaccattgcggaggcttcaggtttccaaacaccagcttcagctttagatgtcaac
caatctgggagctccagactaggccagatgacacctgcttctcagctaaggcttccaagc
gatccccagccttcggaacggttatcactagactcccttgtagtccagtatttgaaacac
caacacaggcagtgccgggctcctatcacaactctcccccctgtgtctctcctacatccg
catgtctgtcctgaacctaaacggttacttgaagctccactaaacatcactgaccgtctt
ggcacccgtgagcttcagagttattacagtggagtccatgggaatcgcagggaccgtcaa
tttgttttcagcagattcaaatcctggagatcttaccgagatgagactgctctcttcaca
agcatttcacttcttggtggtactaatcatttagcagtcggtagccatgctggagaaatc
aagatatttgacgctagcagcggtaacatgctagagagtgtttcaggtcaccaggctccg
gttacacttgttcagtcatatgtctctggtgatactcaactgttgctttcttcgagctac
agtgatgtgcagttgtgggacgcgtctgatataactgttgggtctaaacactcgtttgat
ggttgcaaggctgcaaagttcagcaactctgggtcacttatcgcagcgctctcttctgaa
ggaccaacaaaagatgttcttctgtataacgtagagaccggcagtctttccgagaaattc
actgacccagacacttcttcccggactagtccctatactcttgtacacttcaacccttgc
gattcattaatattgtggaatggtcatctctgggatcgccgtgtcccaaatagttgcaaa
cggtttgatcagtttactgattatggtggcggcggttttcatccttctcgaaatgaggtg
atcataaactcggaggtctgggacctgaggaatatgaatacgaggcttattcggagtgta
ccatcactggaccagacagctattacgttcaactccaggggagatgttatatacgcaatg
ctgaggagaaacattgaggacgtgatgtctgctgtcaacacacgccgtgcgaagcatccg
ttgtttgctgctttccgcactcttgacgcggtgaactattcagacattgccactataccg
gtggaccgatgccttctcgacttcgctacagaaccaacggattctttccttgggctgatc
acaatggaagatcaagatgatatgttttcctcagccaggatgtatgagattggcaggcgg
agaccaacagatgatgactcggatcccgatgatgatggtgagacagaggatgaagatgaa
gatgatgaagacgacgaagatgacctggaccggattcttggactagctggagacgatagc
gacagtggagatgatgacatgagcagcgatgacaatgaagataacagtgccagtgatttt
gatgatgatgatggaggtatgttctttgatggtgggattatggagattgtaagtgagggt
gatgatgaagacgataatggtgatagtgatggtgaagacagtgatgatgacggtgattcc
attagcagtggcgaagaggattttctcaaccgcattcattaa
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integrated database retrieval system
