Brassica napus (rape): 106424616
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Entry
106424616 CDS
T04128
Name
(RefSeq) diaminopimelate decarboxylase 2, chloroplastic-like
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bna
Brassica napus (rape)
Pathway
bna00300
Lysine biosynthesis
bna00470
D-Amino acid metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01230
Biosynthesis of amino acids
Module
bna_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
106424616
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
106424616
Enzymes [BR:
bna01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
106424616
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
106424616
NCBI-ProteinID:
XP_048625224
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Position
C9:59728523..59731041
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AA seq
486 aa
AA seq
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MASATQLLSQPPSLRGNLNRYQSSLPRISFLSLNSTSKPLNRLSVKAAAAASQNSVKTPT
KDAAFKHCFKKSSDGFLYCEGTKVEEIMESVERRPFYLYSKPQITRNVEAYKEALEGVRS
VIGYAIKANNNLKILEHLRSKGCGAVLVSGNELRLALIAGFDPTKCIFNGNGKLLEDLVL
AAQEGVFVNVDSEFDLENIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIR
NEKLQWFLDEVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVEYIDEIRRQGFEVSY
LNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTG
VKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPPAPEAEVSKFDVVGPVCESADFLG
KDRELPTPPKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEDDGSITKIRHAETFEDHL
RFFNGL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagctactcagctcctctcccaacctccatctctccgcggaaacctaaaccga
taccaatcctccctcccaagaatctcgtttctgtctcttaactccacctcgaaaccactt
aaccgcctctccgtcaaagccgccgccgccgcgtcccaaaactcggtgaaaacaccgacg
aaggatgctgcgttcaagcactgtttcaagaaatcctcagatggattcctctactgcgag
ggaactaaggttgaagagatcatggagagcgtcgagagaagacctttctacttgtacagc
aagccgcagatcacgaggaacgtcgaggcgtacaaagaggccttggaaggtgtgaggtcc
gtcattggctatgctattaaagctaataacaacctcaagattttggagcatttgaggagt
aaaggctgtggtgctgttctcgttagtggaaacgagctcaggcttgctcttattgctggc
ttcgatcccaccaagtgtattttcaatggaaatgggaagctgttggaggatttagtttta
gctgctcaagaaggagtttttgtaaatgttgatagtgagtttgacttggagaatattgtg
gaagcttcgagaatatctggtaagcaggtcaatgttctgctgcgtatcaatcctgatgtg
gatcctcaggtgcatccatatgtagcaaccgggaacaagaactcaaagtttggtatcagg
aacgagaagcttcagtggtttctcgatgaggtgaaggcgcatcccaatgagctcaagcta
gttggagctcattgccatcttggctctaccattacaaaggtggatatattcagagatgct
gcggttctcatggtggagtacattgatgagatcaggcgtcaaggctttgaagttagttac
ttgaacatcggtggtggtttagggattgattattaccatgcaggtgctgtacttcccaca
cctatggatctcatcaacactgtaagagagcttgttctgtcacgggacctgaatctaata
atcgagccagggaggtcgttgatagcaaacacgtgctgtttcgttaaccatgtgacaggt
gtgaagacgaatggaactaaaaactttatagtgatcgatgggagtatggctgagctaatc
cgtcccagtctttatgatgcctatcagcacattgagttggtctctcctccagcacctgaa
gcagaggtttcgaaattcgacgtagtgggtcctgtttgtgaatctgctgattttttgggc
aaagacagagagcttcccactcctccaaagggagctggtctagtggttcatgatgctggt
gcgtactgtatgagcatggcttccacttacaatctcaagatgcgtcctccggaatactgg
gttgaagatgatggttcaatcactaagatcaggcatgctgagacattcgaagaccatttg
cgtttcttcaacggtctatag
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