Brassica napus (rape): 106424657
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Entry
106424657 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin receptor RAD23c-like
KO
K10839
UV excision repair protein RAD23
Organism
bna
Brassica napus (rape)
Pathway
bna03420
Nucleotide excision repair
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106424657
09124 Replication and repair
03420 Nucleotide excision repair
106424657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bna03051
]
106424657
03400 DNA repair and recombination proteins [BR:
bna03400
]
106424657
Proteasome [BR:
bna03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
106424657
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
106424657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
UBA
Ubiquitin_2
UBA_7
Dsc3_N
Ubiquitin_4
Peptidase_C9
Motif
Other DBs
NCBI-GeneID:
106424657
NCBI-ProteinID:
XP_048625094
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All DBs
Position
C9:57386115..57395710
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AA seq
291 aa
AA seq
DB search
MKIFVKTLKGARFEIQVKPDDSVADVKKNIETVLGVTAAEQMLIHKGKMLKDETTLEANN
VSEKSIIGVIKRKPASTGTSSLKPQACWTLSLTRLLDXSSMQYXLCLAYNDIDKALEYLY
FVSSSSEPFLRLISFFLLKELPVQFEDPFITEGETHQEPERPSVADLERALDFARYNPEY
EYLRALAQSDGFLRLQLEGGTCGNEMQQQPHEHQEVQTNEPNNGGDGGNLVGESKETDVE
VATPEDYELIARLEALGFERGDAEVAYFASNKNVQEAANQLLSDKHEPRRE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatttgtcaaaactctgaagggggctcgctttgagatccaggtcaaacccgat
gattcggttgctgatgtgaagaagaacatagagacggtgctgggagttactgctgcagaa
caaatgcttattcacaaagggaaaatgcttaaagatgaaacaacattagaggctaacaac
gtttccgagaaaagcattattggcgttataaagagaaaacctgcatctaccggaacgtct
agccttaaacctcaggcgtgttggactctttctttaactagactcttagactgaagtagc
atgcagtatnctttatgtttggcatataatgacattgataaagctttggaatatctttac
tttgtgagttcttcttcagaaccattcttaagactgataagtttttttcttttaaaggag
ctcccggtgcagtttgaagatcctttcataacggagggtgaaactcatcaagaacctgaa
cgtccttcagtagccgacctagaacgggcacttgatttcgcgcgttacaatccggagtac
gagtatctacgagctttggcgcaatcagatggcttcttacgcttacaacttgaaggagga
acatgtggcaacgaaatgcagcagcagcctcatgaacaccaagaagtccagaccaacgaa
ccaaacaatggaggagatggtggcaacctagtgggagaatctaaagaaactgatgttgaa
gtcgccacccctgaggattatgaattgatcgcacggctggaagcactgggatttgagaga
ggtgatgcagaggtggcgtacttcgcctccaacaagaacgtacaagaggctgcaaaccaa
cttctcagtgacaagcacgagcctcgacgagaatga
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