Brassica napus (rape): 106424727
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Entry
106424727 CDS
T04128
Symbol
BNAC09G42120D
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bna01003
]
106424727 (BNAC09G42120D)
Enzymes [BR:
bna01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
106424727 (BNAC09G42120D)
Glycosyltransferases [BR:
bna01003
]
Polysaccharide
Structural polysaccharide
106424727 (BNAC09G42120D)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
106424727
NCBI-ProteinID:
XP_013720927
UniProt:
A0A078GMB0
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All DBs
Position
C9:57647149..57650151
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AA seq
508 aa
AA seq
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MCKMEKSLYHRKLWEIKVRLLGDSKVEKLRNSFASRSPTSLWMIRAVSVLLLWSCFVHLM
ALGDMWGPRLFNGWPSCFNQRGLSTAAEMKSLPAKIALPPKRVYQNNGYLMVSCNGGLNQ
MRAAICDMVTVARYMNVTLIVPELDKTSFWNDPSEFKDIFDVDHFISSLRDEVRILKELP
PRVKKRVELGMYHEMPPISWSNMSYYQNQILPLVKKHKVLHLNKTDSRLANNGLPVEVQK
LRCRVNFNGLKFTPQIEELGRRVVNILREKGPFLVLHLRYEMDMLAFSGCSHGCNPEEEE
ELTRMRYAYPWWKEKVINSEEKRKEGLCPLTPEETALTLTALGIDRNVQIYIAAGEIYGG
ERRMKALTDAFPNVVRKETILESSDLDFCRNHSSQMAALDYLVAVESDIFVPTNDGNMAR
VVEGHRRFLGFKKTIQLNRKFLVKLIDEYTEGLLTWDVFSSMVKAFHSTRMGSPKRRLVI
PNKPKEEDYFYSNPQECLQLLDEPLRVI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaaatggagaagtctctttaccacaggaaactatgggagataaaggttaggctt
ttaggggatagcaaggttgagaagctcaggaactcctttgcttcgaggtctcctacgagc
ctatggatgattcgtgctgtttctgtattgctgctctggagttgttttgttcatttgatg
gctttgggagatatgtggggaccgagactgttcaatggttggccttcttgtttcaatcaa
cgtggtttgtccactgccgcagagatgaagtctctccctgctaagatcgcccttcctcct
aaaagggtgtatcagaacaatggttatcttatggtttcttgcaatggaggactcaatcaa
atgcgagcagctatatgcgatatggtaactgttgcacggtacatgaatgttacacttatt
gtgcctgagcttgacaagacctccttttggaacgatccaagtgagtttaaagacattttc
gatgtggatcacttcatatcttcgttgagagatgaagttcgtatacttaaggagttgcct
ccaagggtcaagaagagagttgagcttgggatgtaccacgaaatgcctcctattagttgg
tcaaacatgtcttactaccaaaatcagattcttccattggtgaagaagcataaggtttta
cacctgaacaaaaccgactccagactcgctaataatggactgcctgtggaggttcagaag
ctgaggtgccgagtgaatttcaacggccttaagtttactcctcaaattgaagagctaggg
agacgagtagtcaatatcctgagagagaaaggtccctttctcgtcttgcatctcagatat
gagatggatatgttagcgttttccgggtgctcacatggttgcaaccccgaggaagaagaa
gaattaacaagaatgagatatgcttatccatggtggaaagagaaagtcataaactctgag
gagaagaggaaagaaggcctttgccctttaactccagaggaaactgctctcaccctgacc
gcgttaggtattgaccgtaatgttcaaatatacatagctgctggagaaatctacggtggt
gaaaggcggatgaaggcgttaacagacgcttttccaaatgtggtccggaaagaaaccata
ctagaatcctctgatctcgatttttgccggaaccattcatctcaaatggctgcactcgat
tacctagtggctgttgagagcgatatatttgttccaaccaatgatgggaacatggcaaga
gtcgttgaaggtcatcgcaggttcttgggatttaagaagacaattcagctgaataggaag
ttcctagttaagctgatagatgaatataccgaaggattgttgacttgggatgtgttctca
tccatggtgaaggcctttcactctactcgtatgggaagtccgaagagacggttagtgatt
ccgaataaacccaaggaagaagactacttctactccaacccgcaagaatgtctgcagctg
ttagatgaaccactgagagtcatttga
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