Brassica napus (rape): 106425080
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Entry
106425080 CDS
T04128
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related isoform X1
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106425080
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106425080
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106425080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
Prok-RING_4
zf_RING_Vps8_fungal
zf-RING_16
VPS18_RING_C
zf_RING_Vps8
zf-RING_Vps41
Prok-RING_1
RINGv
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
106425080
NCBI-ProteinID:
XP_013721259
UniProt:
A0A078GDK6
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All DBs
Position
C5:complement(43278475..43281228)
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AA seq
315 aa
AA seq
DB search
MPMENDNDHAANVVLTAEQASKVNDTAVRLPENLQTGVVSESGGGSEKGEEAVETAVEED
VDESGSNTVGELPPRSSSARVPFTNLSQIDADLALARTLQEQERAYMMLAMNSEVSDYGS
WETGSYVYEDDDEYETDDDPQGDAPDVNAHEDEGRIADEEEVGYSDDEAFARAIQEAEER
EMADRLSALTGLANRVEDPEEDDHTSQDAWDEMDPDELSYEELLALGDIVGTESRGLSAD
TIASLPSKRYKDGDNQNGTNESCVICRLDYEDDDDLILLPCKHSYHSGCINNWLKINKSC
PVCSAEVSTSTAGQS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcccatggagaacgacaatgaccacgccgccaacgtcgtcctcaccgccgagcaagcg
agcaaggttaacgacactgccgtacggttgccggagaatcttcagaccggcgtcgtctca
gaatccggaggtggaagcgagaaaggagaggaagcggtggagacggcggtggaggaggat
gtggatgagagcggatcgaatacggtgggagagctacctccccgatcttcctcagcgaga
gttccgttcactaatctaagccagattgatgcggatcttgctctcgctcgcacgctccaa
gaacaggagcgggcgtatatgatgctggcgatgaacagtgaagtcagtgactatgggagc
tgggaaactggaagctatgtatacgaagatgatgacgagtacgaaacagatgatgatcct
cagggagatgcgccagatgttaatgctcatgaagatgaaggcaggattgctgacgaagaa
gaagttggctattcagatgatgaagcctttgctagagctattcaggaagctgaggaaagg
gaaatggcagataggttgtctgccttaactgggttagcaaatcgggttgaagatccggag
gaggatgatcatacttctcaggatgcctgggatgagatggatcctgatgagctttcatat
gaggagttgcttgcgcttggcgatattgtgggaaccgagagtagagggctgtctgctgat
acaattgcatctttgccttcaaaaagatataaagatggagacaatcagaacggaaccaat
gaatcttgtgttatatgtcgtctggactatgaggatgacgatgacttgatacttcttcca
tgcaaacattcttaccactcggggtgcataaataactggttgaagataaacaagagttgc
ccggtatgcagcgcagaagtttcaacttccacagctggacaaagctaa
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