Brassica napus (rape): 106425219
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Entry
106425219 CDS
T04128
Name
(RefSeq) coatomer subunit beta'-2 isoform X1
KO
K17302
coatomer subunit beta'
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106425219
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106425219
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
106425219
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106425219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
WD40_like
WD_LRWD1
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
106425219
NCBI-ProteinID:
XP_013721390
LinkDB
All DBs
Position
C6:16632137..16638784
Genome browser
AA seq
914 aa
AA seq
DB search
MPLRLEIKKKFAQRSERVKCVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTDLPV
RSAKFISRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQSLDGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLG
REIPVASMDNTGKIIWAKHNEIQTANIKSIGAGYEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSSKIKTFSKNFQ
EKKSIRPTFSAEKIFGGTLLAICSSDFICFYDWAECRLIQRIDVTVKNLYWADSGDLLAI
ASDTSFYILKYNRDLVSAHFDSGRSTEEEGVEDAFEVLHENDERVRTGLWVGDCFIYNNS
SSKLNYCVGGEVTTMYHLDRPMYLLGYLASQSRVFLVDKEFNVIGYTLLLSLIEYKTLVM
RGDLDKASEILPTIPKDQHNSVAHFLESRGMIEDALDIATDPDYRFELAIQLGRLEIAQE
IAVEVQSESKWKQLGELAMSSGKLKLAEECMKYAMDLSGLLLLYSSLGDAEGVSKLVTLA
KEQGKNNVAFLCLFMLGKLEDCLELLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSK
INSKAAESLADPEEYSNLFDDWQVALSVEAKAAETRGVYSAAENYPSHADRSSVTLVEAF
RNLQVEEEESFENGDMDHEQEVVAEENGDEEEKNDEEKHEGVVVDGDSTDGAVLVNGSEA
DEEWDTNNEGNPSA
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactcgagatcaagaaaaagtttgctcaaagatctgagagagtcaaatgt
gtggatctgcatcctacagaaccatggattttagcaagtttgtactctggaaccttgtgt
atttggaactaccagacacaggtgatggcaaagtctttcgaggtgaccgatttaccagtt
cggtcagccaagtttatatcacgaaagcaatgggttgtggcaggagctgatgatatgtac
atccgtgtatacaattacaataccatggataaggttaaagtgtttgaggctcactcagac
tacattagatgcgtggctgttcatccaacccttccatatgtgctatcatcttctgatgat
atgctcataaagctttgggactgggaaaaaggttgggcttgcactcagatattcgaggga
cactcgcactatgtgatgcaagtcacatttaatccaaaagacaccaacacttttgccagt
gcatcacttgatcgcaccataaagatctggaatcttggttctccagacccaaattttaca
ttggatgcccatcagaaaggagtgaactgtgtagactatttcactggtggtgacaagccc
tatttgattaccggctctgatgatcacacagctaaggtctgggactatcaaacaaaaagt
tgtgtccagtccctggacgggcacacacacaatgtttctgccgtatgtttccacccagaa
cttccaattataatcacaggttcggaagatggtaccgttcgcatttggcatgcaactacg
tacaggctagagaacacattaaattatggcctcgagagagtttgggccattggctacatt
aaaagttcacgccgggttgtgattggatatgatgaaggaacaatcatggttaaacttgga
cgagaaattcctgtcgctagcatggacaataccggaaaaatcatatgggctaagcataat
gaaattcaaactgcgaacatcaaaagtattggtgcaggttacgaggttactgatggagag
aggttgcccttggctgttaaagagcttgggacttgtgatctttatccacaaagcttgaag
cacaatccgaatgggaggtttgtcgtagtctgtggagacggggagtatataatctacacg
gctttggcttggagaaataggtcatttggatctggacttgaattcgtttggtcgtctgag
ggggagtgtgcggttagagaaagctcatcaaagatcaagacgtttagcaaaaatttccag
gagaaaaagagtatccgccctactttctcagctgagaagatctttgggggaaccttgtta
gctatatgttcaagtgacttcatctgcttttatgactgggctgaatgtaggctgattcaa
cgtattgacgtcactgtaaagaatctttattgggctgacagtggtgatttattagccatt
gctagtgacacgtcattctacatcttgaaatacaaccgcgacttagtttctgcacatttt
gatagtggaagatcaactgaggaagaaggtgttgaggatgcatttgaggttctccatgag
aatgatgaacgtgttaggacaggtctatgggttggtgactgtttcatttacaacaactct
tcttcaaagcttaactattgtgtcggaggcgaggtaactacaatgtatcatttagaccgc
ccaatgtatttgttgggctatctcgcaagtcaaagtcgggtgttcctggttgacaaagaa
ttcaatgtaataggatacaccttactgctaagcctgattgagtacaagactcttgtgatg
cgaggtgatctagacaaagctagtgaaatcttacctacaattcccaaagatcagcataat
agtgttgctcatttcttggagtcacgaggaatgattgaagatgctctggacattgcaact
gaccctgactacagatttgagttggccatacaactgggtagacttgaaattgcgcaggaa
atagctgtagaagtacagagcgagtctaagtggaagcaattaggagagttagccatgtcc
tctgggaagctgaaattggcagaggaatgcatgaagtatgcgatggatttgagtggtttg
ttactgctttattcttctctgggagatgctgaaggcgtgtcaaaacttgtaacacttgct
aaagagcaagggaagaacaatgtcgcctttctttgcctattcatgctgggtaaattggaa
gattgtttggagttattagtggagagtaaccggataccagaagctgctctgatggcaaga
tcatatcttccgagcaaagtgtctgagatagtagctctgtggaggaaagatctgagcaag
attaattcaaaagcagcagaatctttggctgatcctgaggagtactcaaatctgtttgat
gattggcaagtagctctttccgtcgaagcaaaagctgcagagacaaggggagtttattca
gctgcagaaaactatcctagccatgctgatagatcttccgtgaccctggtggaagccttt
agaaacttgcaagttgaggaagaggaatcatttgaaaatggagacatggatcatgagcag
gaggtagtagcagaagaaaatggagatgaagaagaaaagaatgatgaggaaaagcatgaa
ggagtagttgttgatggtgactcaaccgatggagcagtgcttgttaatggaagtgaggct
gacgaagagtgggatacgaataatgaaggaaacccatcagcttaa
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integrated database retrieval system
