Brassica napus (rape): 106425308
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Entry
106425308 CDS
T04128
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106425308
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106425308
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106425308
03036 Chromosome and associated proteins [BR:
bna03036
]
106425308
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106425308
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106425308
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106425308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EF3_N
Htt_N-HEAT_1
PDS5
HEAT_EZ
Adaptin_N
Cnd1
CLASP_N
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
106425308
NCBI-ProteinID:
XP_048618752
LinkDB
All DBs
Position
C7:complement(38196393..38200642)
Genome browser
AA seq
587 aa
AA seq
DB search
MSMTEEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLSTVEETCVREKAVESLCRVGSQMKES
DLVEHFIPLVKRLAAGEWFTARVSACGVFHIAYPSAPDAVKTELRSIYTQLCQDDMPMVR
RAAATNLGKFAATIESAHLKTDVMSMFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVHSIREAAANNVKRLAEEFGPEWAMQHIVPQV
LEMISNPHYLYRMTILRAVSLLAPVMGSEITCSKLLPVVMTGAKDRVPNIKFNVAKVLQS
LIPIVDQSVVEKTIRPGLVELSEDPDVDVRFFANQALQSIDNVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaccgaggagccgctttaccccatcgccgtcctcatagacgagcttaaaaac
gatgacattcagctaaggttgaattcgatcagaaggctttccacgattgctcgcgctctc
ggcgaggagaggacgaggaaggagctgattccctttctgagcgaaaacaatgacgatgac
gatgaggtgctgcttgcaatggctgaggaattgggagtgtttattccttacgttggtggc
gttgagcacgcgcacgttctgcttccaccgttggagactctctccacggttgaggagact
tgtgtgagggagaaagctgttgagtcgctttgcagagttgggtctcagatgaaggagagt
gatttggttgagcatttcataccgttggttaagagacttgcagctggtgaatggttcaca
gccagagtttcagcttgtggagttttccatattgcataccctagcgccccagatgcggtg
aagactgagttgagatcaatatatacccagctctgtcaagatgatatgccaatggtgcga
agagctgcagcaaccaatctggggaaatttgctgctactattgaatcagctcacttgaag
accgacgttatgtctatgtttgatgatcttactcaagatgatcaagattccgttagatta
ttggcggttgagggttgtgctgctcttgggaaattgttggagcctcaggactgtgttgcg
cacattcttcccgtgattgttaatttctcgcaggataagtcttggcgtgtgcgttacatg
gtagcaaatcagctctatgagctttgtgaagccgtgggacctgagcctactaggacggaa
ctggtgcctgcatatgtgcgtctacttcgtgacaatgaggctgaagtacgcatagcagct
gctggaaaagttactaagttttgtcggatcctaaaccctgaacttgctattcagcacatt
ctcccctgcgtaaaggagctatcaacagactcatctcaacacgtcagatctgcactggct
tcagttataatgggaatggctccagtcttgggtaaggatgcaacaattgagcatctcctt
ccaatctttctttcgctgttgaaagatgagtttccagatgtacgcttgaacatcatcagc
aaactcgaccaagtgaaccaggttattgggattgatctactatcgcaatccttgttgcca
gcaattgtagaacttgctgaagatagacactggagggtaagacttgctatcattgagtac
atacctttgttggcaagtcagttaggtgttggcttctttgacgataagcttggcgctctt
tgcatgcaatggttacaagacaaggtccactcaatccgcgaggctgctgccaacaatgtg
aagcgtcttgctgaagaatttggtcctgaatgggcaatgcagcatatagttccacaggtt
cttgagatgatcagcaaccctcactatctgtaccgtatgaccattttgcgtgcggtttct
cttcttgcaccagtgatgggctcagagatcacatgctccaagctcttacctgtcgtgatg
accggggctaaagacagagttccaaacatcaaattcaatgtcgctaaggtgcttcaatcc
ctcattccaattgtcgatcaatcggttgtagagaagacgattcgtccagggcttgtggag
ctaagcgaggatccagatgttgatgtcaggttctttgcaaaccaagctcttcaatctatt
gataatgtgatgatgtcgagctaa
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