Brassica napus (rape): 106425466
Help
Entry
106425466 CDS
T04128
Name
(RefSeq) asparagine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
bna
Brassica napus (rape)
Pathway
bna00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106425466
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106425466
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106425466
Enzymes [BR:
bna01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
106425466
Amino acid related enzymes [BR:
bna01007
]
Aminoacyl-tRNA synthetase
Class II (A)
106425466
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106425466
Prokaryotic type
106425466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
106425466
NCBI-ProteinID:
XP_013721654
LinkDB
All DBs
Position
A1:complement(10347378..10350447)
Genome browser
AA seq
563 aa
AA seq
DB search
MAAAFLPATSLRLTPFSTLRFLSFFPISNPSHYSLFRPHRRPLFEDSPANSRRRCFCTAT
SVSPSSSDGKNNHEQRIGSKVGEFRKKLRIAEVKGGADEGLGRVGQSLSVMGWVRTLRSQ
SSVTFIEINDGSCLSNLQCVMNPDAEGYDQVEAGSVLTGASVCVQGTIVASQGTKQKVEL
KVHKIILVGKCDSSYPIQKKRVSREFLRTKAHLRPRTNTFGAVARVRNTLAYATHKFFQE
SGFVWVASPIITASDCEGAGEQFCVTTLIPSSHETTNTSIDAIPKTKGGLVDWSQDFFGK
PAFLTVSGQLNGETYATALSDIYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLDDDMA
CATAYLQYVVKYVLDNCKEDMEFFDTWIEKGIIHRLSDVVEKEFLQLSYTDAIELLLKAN
KNFEFPVKWGLDLQSEHERYITEEAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAAMDML
VPRVGELIGGSQREERLGVLEARLDELKLDKESYWWYLDLRRYGSVPHAGFGLGFERLVQ
FATGIDNIRDVIPFPRSPGSADF
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgtttctgccggcgacgtcactccgtctcactccattctctactctccgt
ttcttatccttcttccccatctctaatccttctcattactctctcttccgccctcatcgc
cgcccgcttttcgaagattctccggcaaattctcgccggagatgcttttgcaccgctact
tctgtatctcccagttccagtgacggaaagaacaatcatgagcaacgaattgggagtaaa
gtcggagaatttaggaagaagctgaggatagctgaagtgaaaggaggagcagacgaaggt
ctgggtcgggtggggcagagcctcagcgttatgggttgggttcgaacacttcgatctcag
agcagtgtcacattcatcgagataaacgatggctcatgcttatcaaacttgcaatgtgtg
atgaatccggacgcagaggggtatgatcaggtagaagctggttcggttttgactggagca
tctgtatgtgtacaaggtactattgtggccagccaggggactaagcaaaaggtggagctt
aaggttcacaaaatcattctggttggaaagtgtgactcttcctatcccatccagaagaag
agggtcagccgggagtttttgagaaccaaggctcatcttcgtcccagaaccaatactttt
ggcgcggtggctagagttaggaatactctggcgtatgctacacacaagttctttcaagaa
agtggatttgtctgggtggcaagccctattatcactgcctccgattgtgaaggcgctggt
gaacagttctgtgtcaccactctcatccccagctcccatgagaccaccaatacttccatc
gatgcaattccgaaaacaaagggagggttggtcgattggtctcaggacttctttgggaaa
ccagcgttcttgaccgtctctgggcagctcaatggagaaacttatgccaccgctctctca
gatatatacacatttggtcctacatttcgagctgagaactccaacacctccaggcacttg
gctgaattctggatgattgaaccagaacttgcttttgccgacctggatgatgacatggct
tgtgccaccgcctacctccagtacgtcgttaaatacgttcttgataattgcaaggaagac
atggagttttttgatacatggattgagaaaggaatcattcatcgcttgagtgacgtagtt
gagaaagaatttcttcagctgagttacacagacgccattgaacttcttctgaaagcaaac
aaaaattttgaattcccggtgaagtggggactggatttgcagagcgagcatgaaaggtac
ataacagaagaggcatttgggggtcgccctgtgataataagagattatccaaaggagata
aaagcgttttacatgcgtgagaatgatgatgggaagacagtcgcagcaatggatatgctc
gtgcctcgggtaggggagctgataggtggaagccaaagagaggaaagacttggagtgttg
gaagcgagacttgatgagttgaaactcgacaaagagagctactggtggtacctcgacctc
cgtcgctatggttcagttcctcacgcaggatttgggctagggtttgagaggctggttcag
tttgccactggaattgataatatcagagacgttattcctttcccacgctcacctggctct
gcggacttctga
DBGET
integrated database retrieval system
