Brassica napus (rape): 106425605
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Entry
106425605 CDS
T04128
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106425605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106425605
03110 Chaperones and folding catalysts [BR:
bna03110
]
106425605
03029 Mitochondrial biogenesis [BR:
bna03029
]
106425605
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106425605
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106425605
Messenger RNA biogenesis [BR:
bna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106425605
Chaperones and folding catalysts [BR:
bna03110
]
Heat shock proteins
HSP60 / Chaperonin
106425605
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106425605
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106425605
Exosomal proteins of other body fluids (saliva and urine)
106425605
Exosomal proteins of breast cancer cells
106425605
Exosomal proteins of colorectal cancer cells
106425605
Exosomal proteins of bladder cancer cells
106425605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Spike_torovirin
Motif
Other DBs
NCBI-GeneID:
106425605
NCBI-ProteinID:
XP_013721781
UniProt:
A0A078G220
LinkDB
All DBs
Position
C7:complement(23771539..23774910)
Genome browser
AA seq
607 aa
AA seq
DB search
MASSLSALPLADRNFREKSSLLHSSSSRFVLRARAAAKEVHFNRDGSVTKKLKAGADMVA
KLLGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDL
AGDGSTTSIVLAHGLITEGIKVVSAGINPIQVARGIDKTAKALVLELKSMSREIEDHELA
DVAAVSAGNDYEVGNMIANAFQQVGRSGVVTIEKGKYLVNNLEVVEGMQFNRGYLSPYFV
TDRRKREVEFHDCKLLLVDKKITNPKDMFKILDSAVKEEFPVLIVAEEIEQDALAPVIRN
KLKGNLKAAAIKAPSFGERKSHCLDDLAILTGATVIRDEMGLSLEKAGKEVLGTAKRVLV
TKDSTLIVTNGDTQKAVEERVSQIKKLVQNTEENFQKKILNERIARLSGGIASIQVGAQT
QVELKDKQLKVEDALNATKSAIEEGIVVGGGCALLRLAAKVDSIKDTLDNTEQKIGAEIF
KKALSYPIRLIAKNAGTNGNIVIEKVLLNENMMYGYNAAKNQYEDLMLAGIIDPTKVVRC
CLEHAASVANTFLTSDAVVVEIKENKPRPMINPPLPTSPAASSMFPDRNLPRFPQIMPRT
RNHFPRK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcactctctgcattacctctcgctgatcgaaattttcgcgaaaagtcttct
cttttgcactcttcgtcttctcgtttcgttcttagagcaagagccgccgcaaaagaggtc
cacttcaaccgtgatggctctgtcaccaagaaactcaaggcaggtgcagatatggtagca
aagctattaggcgttacattgggtccaaagggacgaaacgtggtgttgcagaacaagtat
ggacctcccaagatcgtcaatgacggtgaaactgttctcaaagagattgaattagaggat
ccgttggagaatgttggagtgaaacttgtgaggcaagcaggtgctaagactaatgacctt
gctggtgatggttccactacatctatagtgcttgctcatggccttatcactgaaggtatt
aaggtggtttctgctgggataaatccaatccaagttgctcgtggtattgataaaactgca
aaagctcttgttttagagctcaagtctatgtccagagagattgaggatcatgagcttgct
gatgttgcagcagttagcgcagggaacgactacgaagtagggaacatgattgcaaatgct
tttcagcaagtaggaaggagtggtgtagttacgatagagaaaggcaaatacctagtgaac
aatcttgaggttgtggaaggaatgcagtttaatcgtggttacttatctccttactttgtt
actgatcgaaggaagagagaagttgagttccatgattgcaagctgctcttggttgataag
aaaataacaaatccaaaagatatgttcaagatacttgactctgctgttaaagaggagttt
ccagttcttatagttgctgaggagatagagcaagacgctcttgctcctgttattaggaac
aaactaaaaggtaacctgaaggcggcagctattaaagctccttcgtttggagagcggaag
agccattgcttggatgatcttgctatcttaactggagctactgtgatcagagatgagatg
gggttgagcttagagaaggcaggaaaagaagttttaggaacagcaaaaagggttcttgta
actaaggactcaacactgattgttactaatggggacactcagaaagcagttgaggaaagg
gtttctcagattaaaaaacttgtccagaacactgaggaaaattttcagaagaagatcctc
aatgaaaggatagccagattatctggtggaattgcatcaatccaggtaggtgcacagacg
caagttgagttgaaggataaacagctaaaggttgaagatgccctgaatgcaactaagtca
gcaattgaagaagggattgtagttggtggtggctgtgctctcctgagactggctgctaaa
gtagacagcattaaagacaccctagacaacacagaacagaagattggagctgaaatattc
aagaaagcattgagctaccctataagacttatagccaaaaacgcaggcacaaatggcaat
attgtcatagaaaaggtattattgaacgaaaacatgatgtacggttacaacgctgcaaag
aatcaatacgaagatctgatgttggctggtatcatcgatccgaccaaggttgtgagatgt
tgcttggaacacgctgcatcagtggctaatacgtttctgacgtcagacgctgttgtggtt
gagattaaagaaaacaaaccgaggccaatgattaacccaccattgcctacttctccagct
gcatcctccatgttccctgacagaaacttgccaagattccctcaaattatgcccagaact
cgaaaccactttccaaggaagtag
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