Brassica napus (rape): 106425880
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Entry
106425880 CDS
T04128
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106425880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106425880
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106425880
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_NXF1-5
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
106425880
NCBI-ProteinID:
XP_048594023
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Position
A8:complement(19631562..19634037)
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AA seq
362 aa
AA seq
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MVMVVGETSMELDQCFQMMMMKMEGVSIKEWKDIPVELLMRILSLVDDRNVIAASGVCCG
WRDAISLGLTRLRLSWCNNNMNSLVLSLAPKFVKLQTLILRQDKPQLEDNAVEAIANHCH
ELQELDLSKSLKLTDRSLYALAHGCPNLTKLNLSGCTSFSDKAIAYLTTFCRNLKVLNLC
GCVNAVSDYTLEAIGNNCNQMQSLNLGWCEKISDDGVMSLAYGCPDLRTLDLCGCVLITD
ESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGGQWKSSAKKSKFDEEGLR
SLNISQCTALTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLTSVHCACILQAHRAVPHS
AH
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggtagtaggagaaacatccatggagctagaccagtgttttcagatgatgatg
atgaagatggaaggagtctcgatcaaagagtggaaagacatccctgttgagcttctcatg
agaatcctctcccttgttgatgatcggaatgtcattgctgcttctggtgtttgctgtggt
tggagagatgccatctctcttggtctcactcgtctccgtctctcttggtgcaataacaac
atgaacagcttggttctttctcttgctcccaagtttgtaaagctgcaaactttaatactg
cgccaagacaaaccccaactagaggacaatgcggtggaggccatagcaaatcactgccat
gagctacaagagcttgatctcagcaaaagcttgaaactcactgaccgttccctctacgca
cttgctcatggctgccccaacctcactaaactcaaccttagcggctgcacttcattcagc
gacaaagctattgcgtatctgaccacgttctgcagaaacctgaaggttctgaatctttgt
ggatgtgtcaacgctgtttctgattacaccttggaggctattgggaacaactgcaatcag
atgcagtcactaaacttggggtggtgtgagaagattagtgatgatggggttatgagttta
gcttatggctgtcctgatctcaggaccctggacttgtgtggttgtgttctcattacagat
gagagtgtggtagctttagctgattggtgcgtccacttgagatcactggggctatactac
tgcagaaacataacggacagagccatgtactcgctagctcaaagcggggtgaagaacaaa
ccaggggggcaatggaaatcatcagctaagaagagcaaattcgacgaagaagggctgagg
agtctcaacatcagccaatgcactgcacttacaccttcagctgttcaagcggtctgcgat
acgtttcctgctcttcacacgtgttcgggaagacattcgcttgtgatgagcgggtgtttg
aacttgacgtctgtgcactgtgcttgtatccttcaggctcatcgcgcggttcctcactct
gctcactga
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