KEGG   Brassica napus (rape): 106425965
Entry
106425965         CDS       T04128                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3C
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bna  Brassica napus (rape)
Pathway
bna03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106425965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    106425965
   03036 Chromosome and associated proteins [BR:bna03036]
    106425965
Transcription machinery [BR:bna03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     106425965
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    106425965
   PBAF complex
    106425965
   GBAF(ncBAF) complex
    106425965
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 DUF7685 SANT_DAMP1_like
Other DBs
NCBI-GeneID: 106425965
NCBI-ProteinID: XP_013722130
LinkDB
Position
A8:19559479..19563353
AA seq 785 aa
MPATEDRRGKWKRRRRGGRRPKQEEEDIEEEDDEEMEEADNNADELHQNGAAAPDPGPGT
SEVVEDCGERISGFPSVVRRVVTRPHASVTAVVAAERGCLRGEVKGQGLLLPSLENISFG
QLQALSCVPADSLCFDPERSDGAAYVISPPSIMEGEGVVKRFGDKVHVLPMHSDWFAPNT
VDRLERQVVPQYFCGKSPNHTPESYMRFRNAIVLKYVDNPEKTLTISDCQGLVDGADTED
LARVFRFLDHWGIINYCATSQCHPGPSKGASDVREDANGEVHVPSAALTSIDSLIRFDKP
ICRHKADEVSSSLPSSDVDLPDLDIRIREHLCDNHCNHCSRPLPTVYFQSQKKEDVLLCS
DCFHDAKFVVGHSCIDFVRVDTSKDYRDQDGENWSDQETLLLLEAVELYNENWVQIADHV
GSKSKAQCILHFLRLPVEDGLLDNVELPGVTDPANPTNGYDHREGASNGALPGSSEQDSD
TEINLPFVKSPNPVMALVAFLASAVGPRVAASCAHECLTVLSADDRLKSDGLQGKEPSLQ
QQDDNSGAQKTSCQNGAEAPTPLPQDKVMAAFKAGLSAASTKAKLFADHEEREIQRLSAN
IVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFAAERARMLSARFGSAGGIAPQAN
SNNLQGMSLSTGGGNNINTLLQQQQQVSAGSSQPSMIPGFSNNPQVHAQMQFMARQQQQQ
AFSFGPRLPLNAIQTNAGSTASPNVMFGLNNPAGGAAASINQTSFSNPMVRSSTGSGSGS
GLGLN
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgccagctactgaagatagaagagggaaatggaaacggcggaggcgaggcgggaggaga
cctaagcaagaggaggaagacatcgaggaagaagacgatgaggagatggaggaagctgat
aataatgccgacgagcttcaccaaaacggcgccgcagcacccgatccaggacccggtact
agcgaggtagttgaagattgcggggagcgcatctctggtttcccttctgtggtcaggcgc
gtggtgacacgccctcacgcgtctgtgacggctgttgtggcggctgagagggggtgtttg
agaggggaggttaaagggcagggcttgttgcttccttctctggagaatatttcgtttggg
cagttgcaggcgttgtcttgtgtaccggctgattctttgtgctttgatcctgagaggagt
gatggagcggcttatgttatctctccaccctctattatggaaggagaaggtgttgttaaa
cggtttggggataaagttcatgtcttgcctatgcattcagattggtttgcaccaaacaca
gtggatcgccttgaaaggcaagtggtgccacagtacttctgtggaaaatcgccaaaccat
acaccagaaagttatatgcgattcaggaacgccattgttttgaaatatgtggataaccct
gagaagacactgacgatttctgattgccaaggattggtagatggtgctgacactgaagat
cttgcacgagttttccgttttcttgatcactgggggataattaattactgtgccacttcc
cagtgtcaccctgggccttctaagggtgcgtcagatgttagggaggatgcaaatggtgag
gtccatgtaccgtctgctgctttgacatctattgatagtttgatcagatttgataagccc
atctgtagacacaaggcagatgaagtcagttcatccttgccgtcttcggatgttgacctc
cctgacttagacatcaggattcgtgaacatctatgtgataaccactgtaaccattgttct
cgtccgcttccaactgtgtacttccaatcgcaaaagaaggaggatgtactcttatgctct
gattgttttcacgatgcaaaatttgtggttggacattcttgtattgactttgtaagagtg
gatacaagcaaagattacagggatcaagatggagagaattggagtgatcaagaaactctc
ttgcttcttgaagctgtggagctctacaatgaaaactgggttcagattgcggaccatgtc
ggttccaaatcaaaagctcagtgtattcttcattttcttcggttacctgtggaggatggt
cttttggataatgttgagcttccaggtgttactgatccggcaaaccctacaaatggatat
gatcacagagaaggagcttcaaatggggctttacctggatcttctgagcaagattctgac
actgagatcaatcttccttttgtcaaatctccaaatccggttatggcattggttgcattt
ttggcgtcagctgttggacccagagttgctgcgtcctgtgctcatgagtgcctcacggtt
ctatctgcggatgataggttgaaatccgatggcttgcaaggaaaagaacccagcttgcag
cagcaagatgataactcgggagcacagaaaacatcctgccaaaacggagcagaagcaccg
actccactgccacaggacaaggttatggctgcatttaaagccggactatcagctgcatca
acaaaagcaaaattgtttgctgatcatgaggaacgtgaaatccaaagactttctgcaaat
attgtaaatcaccagttgaagaggatggagctgaagctaaagcagtttgcagaaatagaa
acgttgttgatgaaagaatgcgaacaagtagagaaaactcgtcagagatttgctgcagaa
cgagcacgtatgctctcagcaagatttggatcagctggaggaatcgccccacaggctaat
agtaataatctccaagggatgtcactatccacaggtggtggtaacaacatcaatactctc
ctgcagcaacaacagcaagtttcagctggctcttctcaaccaagcatgatccctggattc
agcaacaacccacaagttcatgcgcagatgcagttcatggcgcgccaacaacaacaacaa
gcgttctcctttggcccgagattgcctctcaatgcgatacagacgaatgcaggatcaacg
gcttcaccaaatgtcatgtttggacttaataaccctgcaggtggagcagcagcttccatc
aaccagacttcgtttagcaacccgatggttaggtcttccacgggttctggatccgggtcc
ggcttaggcttaaactaa

DBGET integrated database retrieval system