Brassica napus (rape): 106426050
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Entry
106426050 CDS
T04128
Name
(RefSeq) histone-binding protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
bna03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106426050
03083 Polycomb repressive complex
106426050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106426050
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106426050
Histone modification proteins
HAT complexes
HATB complex
106426050
HDAC complexes
Sin3A-HDAC complex
106426050
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106426050
PRC2.2
106426050
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106426050
Heterochromatin formation proteins
Other heterochromatin formation proteins
106426050
Chromatin remodeling factors
NuRD complex
106426050
NuRF complex
106426050
NuRF complex (fruit fly)
106426050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
eIF2A
NBCH_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
106426050
NCBI-ProteinID:
XP_013722219
UniProt:
A0A078HZ42
LinkDB
All DBs
Position
C9:49281936..49283990
Genome browser
AA seq
426 aa
AA seq
DB search
MAKDDVEMRGEAEERIINEDYKIWKKNTPFLYDLVITHALEWPSLTVEWLPSREEPPGQN
YSVQKMILGTHTCENEPNYLMIAQVQLPLEDTESEARQYDDDRSEFGGFGCASGKVQVIQ
QIVHEGEVNRARYMPQNPFMIATKTVSAEVYLFDYSKHPSKPALDGACNPDMRLKGHSSE
GYGLSWSTFKEGHLLSGSDDAQICLWDVCATPKSNLLDAQQIFKAHEGVVEDVAWHMKHA
HLFGSVGDDQYLHIWDLRSPSPSRPVKSVEAHSMEVNCLAFNPVNEWIVATGSTDKTVKL
FDLRMLNSALHTFDSHKEEVFQVGWNPNNETILASCCLGRRLMVWDVSRINDEQTAEDAE
DGPPELLFIHGGHTSKVSDFSWNPCEDWVISSVSEDNILQIWQMAENIYHDEDDGPGTVE
EPTNGS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagacgacgtggagatgcgaggggaggcggaggagcgtataataaacgaagac
tacaagatctggaagaagaacactcctttcctctacgacctcgtcatcactcacgctctc
gagtggccttcccttaccgttgaatggctccccagccgcgaggagcctcccggtcaaaac
tactccgtccagaagatgattctcggtacccacacttgcgagaacgagcccaattatctc
atgattgcccaggttcagcttcctctcgaagacaccgagagcgaagcgcgtcaatacgac
gacgaccgctccgagtttggtgggtttggctgcgcctccggaaaggtgcaagttatccag
cagatagttcacgaaggtgaggtgaatcgagctcgctatatgcctcagaacccttttatg
attgccaccaagacggttagtgcggaggtgtatctgttcgattacagcaagcacccgtct
aagccagcgcttgatggagcttgcaaccctgatatgaggctcaagggtcacagctctgaa
ggttatggcctgtcttggagtaccttcaaggaaggtcatttgctcagcggctctgatgac
gctcagatctgcttgtgggatgtttgcgccactcctaaaagcaatcttcttgacgctcag
cagatcttcaaggctcatgaaggcgtcgtggaagatgttgcatggcatatgaaacatgca
cacctctttggatccgttggagatgatcaataccttcatatatgggatcttcgttctcct
tctcccagtagaccagtaaagtcggtggaagctcactccatggaggttaattgcttagct
ttcaatccagttaatgagtggattgtggcaacagggtcaactgataagactgttaaatta
ttcgatctacggatgctaaacagcgctcttcacacatttgatagccataaggaagaggtt
ttccaagttggctggaacccaaacaacgagacaatcttagcctcatgttgccttggaaga
cggcttatggtttgggacgttagcaggatcaacgacgaacagacagcagaggatgcagag
gacggcccaccggagctgctgtttatccatggtggtcacaccagcaaagtttcagatttc
tcgtggaacccttgtgaagattgggttatatccagtgtatctgaggacaacatactccaa
atatggcaaatggctgagaacatttatcatgacgaggatgatggtccaggtacagtggaa
gaaccaacaaacggttcttag
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