KEGG   Brassica napus (rape): 106426050
Entry
106426050         CDS       T04128                                 
Name
(RefSeq) histone-binding protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
bna  Brassica napus (rape)
Pathway
bna03082  ATP-dependent chromatin remodeling
bna03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106426050
   03083 Polycomb repressive complex
    106426050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bna03036]
    106426050
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     106426050
  Histone modification proteins
   HAT complexes
    HATB complex
     106426050
   HDAC complexes
    Sin3A-HDAC complex
     106426050
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     106426050
    PRC2.2
     106426050
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     106426050
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    106426050
  Chromatin remodeling factors
   NuRD complex
    106426050
   NuRF complex
    106426050
   NuRF complex (fruit fly)
    106426050
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 eIF2A NBCH_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 106426050
NCBI-ProteinID: XP_013722219
UniProt: A0A078HZ42
LinkDB
Position
C9:49281936..49283990
AA seq 426 aa
MAKDDVEMRGEAEERIINEDYKIWKKNTPFLYDLVITHALEWPSLTVEWLPSREEPPGQN
YSVQKMILGTHTCENEPNYLMIAQVQLPLEDTESEARQYDDDRSEFGGFGCASGKVQVIQ
QIVHEGEVNRARYMPQNPFMIATKTVSAEVYLFDYSKHPSKPALDGACNPDMRLKGHSSE
GYGLSWSTFKEGHLLSGSDDAQICLWDVCATPKSNLLDAQQIFKAHEGVVEDVAWHMKHA
HLFGSVGDDQYLHIWDLRSPSPSRPVKSVEAHSMEVNCLAFNPVNEWIVATGSTDKTVKL
FDLRMLNSALHTFDSHKEEVFQVGWNPNNETILASCCLGRRLMVWDVSRINDEQTAEDAE
DGPPELLFIHGGHTSKVSDFSWNPCEDWVISSVSEDNILQIWQMAENIYHDEDDGPGTVE
EPTNGS
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggcgaaagacgacgtggagatgcgaggggaggcggaggagcgtataataaacgaagac
tacaagatctggaagaagaacactcctttcctctacgacctcgtcatcactcacgctctc
gagtggccttcccttaccgttgaatggctccccagccgcgaggagcctcccggtcaaaac
tactccgtccagaagatgattctcggtacccacacttgcgagaacgagcccaattatctc
atgattgcccaggttcagcttcctctcgaagacaccgagagcgaagcgcgtcaatacgac
gacgaccgctccgagtttggtgggtttggctgcgcctccggaaaggtgcaagttatccag
cagatagttcacgaaggtgaggtgaatcgagctcgctatatgcctcagaacccttttatg
attgccaccaagacggttagtgcggaggtgtatctgttcgattacagcaagcacccgtct
aagccagcgcttgatggagcttgcaaccctgatatgaggctcaagggtcacagctctgaa
ggttatggcctgtcttggagtaccttcaaggaaggtcatttgctcagcggctctgatgac
gctcagatctgcttgtgggatgtttgcgccactcctaaaagcaatcttcttgacgctcag
cagatcttcaaggctcatgaaggcgtcgtggaagatgttgcatggcatatgaaacatgca
cacctctttggatccgttggagatgatcaataccttcatatatgggatcttcgttctcct
tctcccagtagaccagtaaagtcggtggaagctcactccatggaggttaattgcttagct
ttcaatccagttaatgagtggattgtggcaacagggtcaactgataagactgttaaatta
ttcgatctacggatgctaaacagcgctcttcacacatttgatagccataaggaagaggtt
ttccaagttggctggaacccaaacaacgagacaatcttagcctcatgttgccttggaaga
cggcttatggtttgggacgttagcaggatcaacgacgaacagacagcagaggatgcagag
gacggcccaccggagctgctgtttatccatggtggtcacaccagcaaagtttcagatttc
tcgtggaacccttgtgaagattgggttatatccagtgtatctgaggacaacatactccaa
atatggcaaatggctgagaacatttatcatgacgaggatgatggtccaggtacagtggaa
gaaccaacaaacggttcttag

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