Brassica napus (rape): 106426074
Help
Entry
106426074 CDS
T04128
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106426074
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106426074
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106426074
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106426074
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106426074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
106426074
NCBI-ProteinID:
XP_048624797
LinkDB
All DBs
Position
C9:complement(49085696..49090032)
Genome browser
AA seq
979 aa
AA seq
DB search
MEIQTGQDGSRAAVSSSSASAVFRKIEFHLARKPFNGFSNRGSDFKMETLNPSSSSNTNN
RAFSSPSVKKVDSPDSLDRELTFTKTIRKIGAGLENLGNTCYLNSVLQCLTYTEPLAAYL
QDVAHEQRCRVAGFCALCAMQRHVRTALQSTGRSLAPKYLVSNLRCVSQNFRKCRQEDAH
EYMINLLECMHKCCLPSGVPSESSDAYRSSLVHQIFGGSLRSQVKCAQCSHCSDKFDPFL
DLSLDISRADSLQRALLRFTAVELLDNGSKVYQCERCRQKVKAIKQLTVFKAPSVLTVHL
KRFEPHRSEKIDKKVEFPSAIDMKPFVSGPYEGNLKYTLYGVLVHYGGSIHSGHYYCFVR
TSSGMWYSLDDNEVIQASEKTVFNQKAYMLFYVRDRQNTAPKNPVTVAKKETSKESVAVN
RASLIVSSNRNDQVNGSTVIKACSLNAPVANGTAPLRACDNGSPACLTPKDANAKDPPSS
VEGKEILEGKNGTAPVKSSDQGAPAVLTQKDKDNQKDSMSSVEAKENLKMENSSAPPSES
RDQGAPAVLTQKELSVVAANVTSPLRPCEQGDPAVLTPKDLNAKETQTNPPSSVERKENL
ERPCDVGAPVVLTQKDLINNKKEESLPQANGEGSLVKEDSTAACTMIPGKASPLLDGSTN
TQILVNLPTSVAKAENSVDEKNSANNLNESDTSLKVKNDNSPMEEAVLDNQTLVHQSDES
ATESIKQTSAEKTLTTQRKTRKRNMKTLRVGLSSFKLALGVRKKRGRSRTLAVKGTSESK
KRATDLERSTPLITSKAASGSACCLHGKGKSVSVDNERTRTSNGNMLLASPIVELKERTN
QNGAVLASDQQQPLRSSDLSEASQNAKRKRDNSKEEQILLQKEQVTILTRGLPETVVAKW
DEEVSASKKTGKSEGTRIGYVADEWDEEYDRGKKKKIRIKEEMYVGPNPFQAFASKKQQT
DTKKKWTQGRNTAKTGFRI
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggagatccagacgggtcaagacggatctcgcgccgccgtttcgtcctcttccgcctcc
gccgttttcagaaagatcgagttccacctcgcgaggaaacccttcaacggcttctctaat
cgcggctccgatttcaagatggagactttgaatccctcctcctcatctaacactaacaac
agagcgttctcgtcaccctccgttaagaaggtggacagtcccgattcgttggatcgggag
cttactttcaccaaaaccatccgcaaaatcggtgctggtttggagaatctcgggaacaca
tgttatctcaactcggtgttgcaatgtttgacgtacactgagcctttggctgcttatctg
caagacgtcgcgcatgagcaacgctgccgtgtggcggggttttgtgctttatgtgcaatg
cagagacatgtcaggactgctcttcaatctactggcagaagcttagcacctaagtatttg
gtctctaacctgcgatgcgtatcccaaaacttcaggaaatgtaggcaggaagatgcacat
gagtacatgatcaatttgctggagtgtatgcacaagtgttgtctgccttctggtgtacct
agtgaatcctctgatgcttacaggagtagcttggtacatcaaatttttggtggtagcctc
cgtagtcaggtgaaatgtgcacaatgttcccattgctccgacaagtttgatccatttctt
gacctgagcctagacatttcgagggcagattcattgcagagagcgcttttacgtttcact
gctgttgagctcttagataatggttcaaaggtttaccaatgtgaaagatgcaggcagaag
gttaaggctataaaacagcttactgttttcaaagcaccctctgttttgactgtacatctc
aaacggtttgaacctcatagatccgaaaaaatcgacaagaaagtcgagtttccctctgcg
atcgacatgaaacctttcgtcagtggtccatatgaaggtaatttgaagtacactctatat
ggtgtgttagttcattatggtggaagtatccattctggtcactactactgctttgttcgc
acttcaagtggcatgtggtattcccttgatgataacgaggttatccaagctagtgagaag
actgtgttcaaccagaaggcgtatatgcttttctatgttcgcgatagacaaaatacagcc
ccaaagaatccagttaccgtggctaagaaagaaacttccaaagagagcgtcgccgtaaac
agagcttctttgattgtatcttctaacagaaatgatcaagttaatggttcaacagtcatc
aaagcatgtagtttaaacgctcctgttgccaacggtactgcacccttgagagcgtgtgat
aatggctcgcctgcttgcttgaccccaaaagatgcgaatgcgaaagatcccccaagcagt
gtggaggggaaagagatcctggaggggaaaaatggtacagcacctgtgaaatcaagtgat
caaggtgctcctgctgtcttaactcaaaaagataaagataatcagaaagattccatgagc
agtgtggaggcaaaagagaaccttaagatggaaaatagttcagcaccaccctcggaatca
cgtgatcaaggtgctcctgctgtcctgacccaaaaagagttgagcgttgttgctgccaat
gttacatcacccttgaggccatgtgaacaaggtgatcctgctgtcttgactccaaaagat
ttaaatgccaaagagactcagacaaatcccccaagcagtgtggagagaaaagagaacctt
gagagaccctgtgatgtaggtgctccagtagtcttaactcagaaagatttaattaataac
aagaaggaagagtcacttccacaggctaatggggaaggatctttggtaaaggaggactca
acggctgcatgcacaatgataccaggaaaggcttctcctctcctggatggcagcacaaac
actcaaattcttgtgaatttgcctacttctgtggctaaagctgaaaatagcgttgacgag
aagaactctgctaataatttgaacgagtctgacacttcacttaaggttaaaaatgataat
tcacctatggaagaagctgttcttgataatcagactttggtacatcagtcggatgaatcg
gcaacagaatcaataaagcaaacttctgctgagaagactctcaccacacaaagaaagact
cgcaagcgtaacatgaaaaccctacgggtggggttatcatctttcaagctggcacttggc
gttcgcaaaaaaaggggaagatcaagaaccttagctgttaagggtacttcggagtccaag
aaaagagctacagatctagaacgttccactccactgataactagcaaagctgcttctggc
tctgcttgctgcttgcatgggaagggtaaaagtgtcagtgtcgataatgaaaggacaagg
actagtaatgggaatatgctgcttgcctctccaatcgtagagctgaaggagagaactaat
caaaatggtgccgttcttgcgtcagaccaacaacaaccgttgaggagttcggacttgtct
gaagcaagccaaaacgccaaaagaaagagagacaattcaaaagaagaacaaatattgtta
cagaaagaacaggtgaccattctcacgaggggtttgccagagacagttgttgcgaaatgg
gacgaggaagtttcagcttctaagaagacgggaaagagtgaaggcacgagaattggatat
gtagcagatgaatgggatgaagaatatgacagagggaagaaaaagaagataaggatcaaa
gaggagatgtatgtagggccgaacccgttccaggcgtttgcatcgaagaaacaacaaacg
gatacaaagaagaaatggacacaaggcaggaatactgcaaagacaggcttccggatatga
DBGET
integrated database retrieval system
