Brassica napus (rape): 106426280
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Entry
106426280 CDS
T04128
Name
(RefSeq) beta-hexosaminidase 3 isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
bna
Brassica napus (rape)
Pathway
bna00511
Other glycan degradation
bna00513
Various types of N-glycan biosynthesis
bna00520
Amino sugar and nucleotide sugar metabolism
bna00531
Glycosaminoglycan degradation
bna00600
Sphingolipid metabolism
bna00603
Glycosphingolipid biosynthesis - globo and isoglobo series
bna00604
Glycosphingolipid biosynthesis - ganglio series
bna01100
Metabolic pathways
bna04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
106426280
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
106426280
00513 Various types of N-glycan biosynthesis
106426280
00531 Glycosaminoglycan degradation
106426280
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
106426280
00604 Glycosphingolipid biosynthesis - ganglio series
106426280
00511 Other glycan degradation
106426280
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
106426280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bna03110
]
106426280
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
106426280
Chaperones and folding catalysts [BR:
bna03110
]
Intramolecular chaperones
Others
106426280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Glyco_hydro_10
Motif
Other DBs
NCBI-GeneID:
106426280
NCBI-ProteinID:
XP_013722455
UniProt:
A0A078F247
LinkDB
All DBs
Position
A7:22357005..22367084
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AA seq
534 aa
AA seq
DB search
MRGIATKISGLAPLFVLFIAGAVSSFEDIEKLRIWPLPAEVSHGGRRMYLSEDFKLVTEG
SKYEDPSGILKEGFDRMLAVVRLSHVVSGHRNSSSSGGSALLEGLHVIISSSTDELEYGA
DESYKLVVASREKPYAQLEAKSVYGALHGLQTFSQLCHFNMKKKVIEILMTPWNITDQPR
FSYRGLLIDTSRHYLPLPVMKNVIDSMTYTKLNVLHWHIVDTQSFPLEIPSYPKLWNGAY
SPTQRYTFEDAAEIVNYAGRRGIHVLAEIDVPGHALSWGKGYPSLWPSKNCQEPLDVSSD
FTFKVIDGILSDFSKIFKFKFIHLGGDEVNTTCWSTTPRISKWLKKHRKTEAEAYEYFVL
RAQKIASSHGYEIINWEETFNNFGNKLNPKTVVHNWLGTGVVGRVTAAGLRCIMSNQDKW
YLDHIDTPWQMFYANEPFEMIKDEKRQSLVLGGEVCMWGEHIDASDIQQTIWPRAAAAAE
RLWTPYTKLAENPDKVTTRLAHFRCLLNERGVAAAPLVGGGRVAPFEPGSCLAQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtatagcaacaaagatctccggccttgcgccgctgtttgtgctattcatcgcc
ggggcagtctcctcctttgaggacatcgaaaagttaaggatttggccgttaccggcggaa
gttagccacggtggccgtagaatgtatttaagcgaagatttcaagcttgtgacggaggga
agcaaatacgaggatccttcaggcattttgaaagaaggattcgatagaatgcttgcagtt
gtgaggctgagccacgtcgtctccggccatcggaactcttcaagctccggcggatctgct
ctgcttgagggactccacgtcatcatctcttcctccaccgatgagttggaatatggagca
gacgaatcgtacaaattagtggttgcatcccgagagaagccgtatgcacaacttgaggca
aaaagcgtttacggtgcattgcatggcctacagacattcagccagttatgccattttaat
atgaagaaaaaggtaatagagattttaatgactccatggaatatcacagaccagcccaga
ttctcttaccgtggtcttttgatcgatacatcccgacattatttgccactacctgttatg
aagaacgtgattgattccatgacatacaccaagctaaatgtacttcattggcacattgtg
gacacacagtcgtttcccttagagattccttcgtatccaaaactatggaatggcgcttat
tctcccactcagagatacaccttcgaagacgctgcagagatcgtcaattatgctgggcga
cgagggattcatgtattagctgagattgatgttccaggccacgctctctcatggggaaag
ggatatccttccttgtggccgtccaagaattgtcaagaaccgcttgacgtgagtagtgac
tttacattcaaggtcattgatggcattctctccgatttcagcaagatctttaagtttaaa
tttatccacttgggaggtgacgaagtaaatacaacttgctggtctacaacacctcgaata
tccaaatggctaaaaaaacatcggaaaactgaagcagaagcttatgaatatttcgtacta
cgggcgcaaaagatcgcttcgtcacacggatatgaaatcatcaactgggaagaaaccttc
aacaactttggaaacaaattaaacccgaaaacggtggtccacaactggcttggtactgga
gttgttgggagagtgactgcggccggtttaaggtgcataatgagtaaccaagacaaatgg
tatttggaccatatagacacaccgtggcaaatgttttacgcgaacgagccatttgagatg
ataaaggatgaaaagcgacaaagtctagtacttggtggtgaagtgtgcatgtggggtgaa
catattgatgcttctgacattcagcaaaccatttggcctcgtgcagccgcagctgcagag
cggttgtggactccctacacaaagttggctgaaaatccagacaaggtaactacgaggttg
gctcactttagatgcttgttgaatgaaagaggagttgcagctgcacctttggttggtgga
ggacgagtcgcgcctttcgagccaggttcatgtctcgctcagtaa
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