Brassica napus (rape): 106426384
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Entry
106426384 CDS
T04128
Name
(RefSeq) probable galacturonosyltransferase 5 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
bna
Brassica napus (rape)
Pathway
bna00520
Amino sugar and nucleotide sugar metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
106426384
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bna01003
]
106426384
Enzymes [BR:
bna01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
106426384
Glycosyltransferases [BR:
bna01003
]
Polysaccharide
Structural polysaccharide
106426384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
106426384
NCBI-ProteinID:
XP_013722556
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Position
C4:complement(54288914..54292609)
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AA seq
611 aa
AA seq
DB search
MNQIRRWRRILILSLLLLSVVTPIVFLSNRIKSITSVDRGEFIEEVSDIRYKTNDDLRLT
AFEQDGEGFKEPKRILKDDELNPVVWSSVSNKSHDGSQSSERDKTLVLSEMSEGNSNKTK
EEQALVSQQTTVSSHTAEKFSAKDIQPSPKTKFQRPLAKSEKNSRAQLGPATDDRIKEIR
DKIIQAKAYLNLALPGNNSQIVKELRVRTKELERAVGDATKDKHLSKSSPQRLKAMEIAL
YKVSRVFHNCPAIATKLHAMTYKSEEQARAQKKQAAHLMHLAARTTPKGLHCLSMRLTTE
YFTQDHERAKPFQQSYINPDLYHYVVFSDNVLACAVVVNSTISSSKDPGKIVFHVVTDSL
NYPSISMWFILNPVSRATIQILNIDDTNVLPLDQAQLLMKQNSSDPRVISALNHARFYLP
NIFPGLDKIVLFDHDVVVQRDLSRLWSLDMNGKVVGAVETCHKGEPSYIAMDTLINFSDA
WVAEKFDPKACTWAFGMNLFDLKEWRRQNLTSVYLNYFNQGIKRHLWKAGSLPLGWLTFF
GQAIPLEKRWNVVGLGHESGVKAGDIEEAAVIHYDGIMKPWLDIRIDKYKRYWNIHVPYH
HPYLQRCNIHD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaatccgtcgctggcggaggattttgatcctctctctgctactgctatccgtc
gttactccgattgtcttcctctcgaatcggatcaagagcatcacttccgtcgatagagga
gagttcattgaagaagtgtctgacattagatacaagacgaatgatgatcttagacttacc
gcctttgaacaggatggagaaggcttcaaggagcctaaacgaattctgaaggatgatgag
ttgaatcctgtggtttggtctagtgtttctaataaaagtcatgatggttcgcagtctagt
gagcgagacaaaacacttgttctctcagaaatgagtgagggaaacagtaacaaaaccaag
gaggagcaagcattagtttcacagcaaaccactgtaagctctcatacagcggaaaaattt
tcagcaaaagatattcaacctagtcctaaaaccaagttccagcgccctttggctaagagt
gaaaagaattcaagggctcagcttggaccagcaacagatgataggataaaggagatcaga
gacaaaatcatccaagctaaagcctatctgaatttggccctgcctgggaataactcccaa
atagtgaaggagttgagagttcgaacaaaagagctggaacgggctgtcggtgatgccacc
aaagacaaacatttgtcaaagagctcccctcaaagactgaaggccatggagattgcatta
tacaaagtcagtcgggtctttcacaattgccctgccatcgctaccaaactccatgccatg
acttataaatccgaagaacaagctcgggcgcagaagaagcaagcagcacatttaatgcac
cttgcagcaaggactaccccaaaaggacttcactgcctctcaatgcgtttgacaacagaa
tactttacccaggatcatgaaagagcaaagccttttcagcaaagttatatcaatcctgat
ctctaccattacgttgtcttctctgacaatgttttggcgtgtgcggttgttgttaactct
acaatttcctcgtcaaaggacccgggaaagatagtattccatgtggtgacggattcactc
aattacccatcaatctcaatgtggtttattttaaacccagttagcagagcaacaatccaa
atcctaaacattgatgatacgaatgtcctgcctttagaccaggctcaattgctgatgaag
caaaactcaagtgatccgcgagtcatttcagcgctcaaccatgcacgcttctatctcccg
aatattttcccaggtctggacaagatcgtattgtttgaccatgatgtagtagttcagaga
gacctaagtagactatggagcctcgatatgaatgggaaagttgttggagctgtagagact
tgtcacaaaggtgaaccttcatatattgctatggacacactcataaacttctcagatgca
tgggttgccgagaaatttgaccctaaggcttgcacttgggcgtttgggatgaatctgttt
gatctcaaagaatggagaagacagaatctgacatctgtgtacctgaactacttcaaccag
ggaataaaaagacatctctggaaagcggggagcttgccactaggttggttgacattcttt
gggcaagcgataccattggagaagagatggaatgtggttgggttaggacacgaatcagga
gtcaaagcaggagacatcgaagaagcagcggttatacactacgacgggatcatgaagcca
tggctggacatcaggatagacaaatacaagcggtactggaacatacatgtaccttaccat
cacccatacttgcaacggtgcaacattcacgattga
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