Brassica napus (rape): 106426392
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Entry
106426392 CDS
T04128
Name
(RefSeq) ubiquitin C-terminal hydrolase 12 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Pathway
bna03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106426392
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106426392
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106426392
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106426392
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106426392
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106426392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
USP7_C2
UCH
MATH_2
MATH
UCH_1
RA
ubiquitin
SASP
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
106426392
NCBI-ProteinID:
XP_048607779
LinkDB
All DBs
Position
C3:complement(1380540..1389868)
Genome browser
AA seq
1115 aa
AA seq
DB search
MTMMTPPPVDQQEDEEMLVPHSDVVDGPAQPMEVSEAETAVSTVENQPAEEPPTLKFTWT
IPNFSRQNTRKLYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYAQF
SLAVVNQIHTRYTIRKETQHQFNARESDWGFTSFMPLSELYDPGRGYLANDTVYVEAEVI
VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA
SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
VVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE
GDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
LKRALDEQYGGEEELPQTNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAE
HLRVRLKKEQEEKEDKRKYKAQAHLFTIIKVARDQDLREQIGKDIYFDLVDHDKVRSFRI
QKQTPFQQFKEEVAKEFGIPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREASN
KANTAELKLFLEVELLDERPIPPPEKSKEDILLFFKLYDPEKPELRYVGRLMVKSSSKPM
DITGKLNEMAGFARDEDLELFEEIKFEPGVMCEHLDKKTSFRLCQIEDGDIICFQKHLVK
KEIECRYPAVPLFLEYVQNRQLVRFRALEKPKEDEFVLELSKLHTYDDVVERVAQKLGLD
DPSKLRLTSHNCYSQQPKPQPIKYRGVDRLSDMLVHYNQTSDILYYEVLDIPLPELQGLK
TLKVAFHHATKEEVVIHNIRLPKQSTVGDVIDELKTKVELSHPDAELRLLEVFYHKIYKI
FPLTERIENINDQYWTVRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQVQNFGEPFFL
VIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDSDVVYNRFQRRDVYGA
FEQYLGLEHTDTTPKRAYSANQNRHTYEKPVKIYN
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactccgcctcccgtcgatcagcaagaggatgaggagatgctcgtgccg
cattctgatgttgtcgacggtcctgctcagcccatggaagtttctgaagctgagactgct
gtgagtactgtggagaatcagccagctgaggaacctcccacgctgaaattcacgtggact
atcccaaacttctctaggcaaaacaccaggaagctttactctgatgtatttgtcgttgga
ggttacaaatggcgcatattaattttcccgaaaggaaacaatgttgaccacctgtccatg
tacttggatgttgctgatgctgcgaatttgccatatggttggagccgttacgctcagttc
agtctggctgtagtcaatcaaatccacaccagatataccattagaaaagagacgcaacat
caattcaatgctagagaaagcgattggggatttacatcattcatgccgctcagcgaactt
tatgatcctggtagaggatatttagcgaatgatactgtttacgttgaagccgaagtcatt
gtacgtaaggttcttgattactggtcatacgactctaaaaaagagactggttttgttggt
ctcaagaaccaaggtgcaacttgttacatgaattctctcctacagacgctataccacata
ccttacttcagaaaggctgtataccacatgccaacaactgagaacgatgcgccaacagca
agtatacctttggctctccaaagtttgttttacaagctccagtataacgacactagtgtt
gcgacaaaagagctgacaaagtcgtttggttgggatacatatgattcgttcatgcaacat
gatgtccaagaactcaatcgagttctatgtgaaaaacttgaggacaaaatgaagggaact
gttgtggagggaacaatacaacagctatttgagggccaccatatgaactatattgagtgc
ataaatgtagattacaaatctacacggaaagaatcattttatgatcttcagttggatgtt
aaaggctgcaaagatgtttatgcttcttttgacaaatatgttgaagttgaacgccttgaa
ggagacaacaaatatcatgcagaaggacatggtttacaggatgcaaaaaaaggtgttctt
ttcatcgactttccaccagttcttcagctccagctcaagaggtttgaatatgactttatg
agggacaccatggtgaagataaatgaccggtatgagtttcctctccaattggatcttgat
agagaggatgggaagtatttatcccctgatgctgacaggagtgtccgcaacctgtacaca
cttcacagtgtcttagttcatagtggaggagtacatggtgggcactattacgcttttata
aggcccacgctctcagatcagtggtataaatttgatgatgaacgagtaaccaaggaagat
ttgaaaagggcattggacgagcaatatggtggtgaagaagagctaccacagactaatcct
ggtttcaataacccgcctttcaaattcacaaagtactcgaatgcatacatgcttgtatat
atccgggaaagtgacaaagataaaataatctgcaacgttgatgagaaagacattgctgaa
catttaagggtgaggctgaagaaagaacaagaagaaaaagaagataaaagaaagtacaag
gcacaagctcacctttttacgataattaaggttgcaagagatcaagacctcagggaacaa
attgggaaggatatatattttgatcttgttgatcatgacaaagttagaagtttccggatc
cagaaacagacgccatttcaacaatttaaggaggaggtggccaaagaatttggtatacct
gttcagttacagaggttctggatttgggcaaagcgacaaaatcatacttatcgtcccaat
cgcccacttactcctcaggaggaattacaaccggttggacaaataagagaagcatctaac
aaggcaaacactgcagaacttaagctgtttttggaagtagagctgctggatgaacgtcct
attccccctccagaaaaatcgaaagaagatattcttctgttctttaagctttatgacccc
gagaagccagagttaaggtatgttggcagactcatggtgaaaagttccagcaagcctatg
gatataactggaaaattgaatgaaatggctggttttgctcgtgatgaagacttggaactt
tttgaggaaatcaagttcgagcctggtgttatgtgcgaacacctggataagaaaacttca
ttcagattgtgtcaaatcgaagatggagatatcatttgctttcagaaacaccttgttaag
aaggagattgaatgccgctacccagctgtgcctttgtttcttgaatatgtccagaatcgg
cagctggtccgatttcgtgctctggaaaaacctaaagaagatgaatttgttctggagttg
tcgaagttgcacacttatgacgatgtcgtggaaagagtggcccagaagcttggtcttgac
gatccatccaaacttaggcttacatctcacaactgctattcccagcaacccaagcctcag
cctatcaaataccgtggagtagaccgtctgtctgatatgttagttcactacaatcagacg
tctgatattttgtattatgaagttctggacattcctcttccagaattgcaaggtcttaaa
accttgaaagttgctttccatcatgccacgaaggaagaagtggtaatccacaatatcaga
ctacctaaacaaagcacagtcggggatgttattgatgaacttaaaacaaaggtggagctt
tctcatccagatgcagaactgagattacttgaggtgttttaccacaagatctacaagatt
ttccccttaactgaaagaattgagaatataaacgatcagtactggactgtgcgagctgag
gagattccggaagaagagaagaatattggtccaaatgatcgcttaattttagtgtaccac
tttgctaaggagactggacaaaatcagcaagtgcaaaactttggggagcccttcttcttg
gtaatacatgaaggtgaaactcttgaagaaatcaagaaccgtatccaaaagaagcttcat
gtgtccgatgaggactttgccaagtggaagtttgcgtttatgtcaatggggcgtccagag
tacttgcaggactcagatgttgtttacaatcgctttcagagaagagatgtgtacggtgct
tttgagcagtacctggggttggagcacactgataccactcctaagagggcttattctgct
aaccagaaccggcacacttatgagaagccggttaaaatatacaactag
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integrated database retrieval system
