Brassica napus (rape): 106426460
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Entry
106426460 CDS
T04128
Name
(RefSeq) ABC transporter B family member 28
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
bna
Brassica napus (rape)
Pathway
bna02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106426460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106426460
Transporters [BR:
bna02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
106426460
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_29
AAA_25
RsgA_GTPase
AAA_5
AAA_30
AAA_21
AAA_15
AAA_28
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-GeneID:
106426460
NCBI-ProteinID:
XP_013722633
LinkDB
All DBs
Position
A8:15772280..15777118
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AA seq
717 aa
AA seq
DB search
MASSVTSLLFHHGSTRLIARSRCQSPLLRTCGVTPFLSFRSSRGGSTAPLGLPLKAKSVG
LARAYVTGAPPIVGEEDPKIDGSKSEPEKEESKDLIKWGLVWSLMSKHKLRLVVCLLTLV
GCSTCTLSMPVFSGRFFEVLIGARPDPLWQLLSKIAVLYSLEPIFTIVFVTNMNAIWESV
MATLRAQIFRRVLIQKAEFFDKYKVGELTGLLTSDLGALNSIVNDNISRDRGFRAFSEVF
GTICILFTLSPQLAPVLGLLMLAVSVLVAVYKRSTVPVYKAHGLAQATMSDCVSETFSAI
RTVRSFSGEKRQMSLFGSQILAFQRSGLKLGTFKSINESITRVAVYISLLALYALGGSKV
KTGELAVGTVVSFIGYTFTLTFAVQGLVNTFGDLRGSFAAIERINSILNAVDIDEALAYG
LERDIHTKKVQDENLRLFLSSGPNVNIRHLDKYYMSDLKSTNNLRTLTWAGDVCLDDLHF
AYPLRPDVKVLDGFSLTLRAGTVTALVGSSGAGKSTIVQLLARFYEPTQGRITVAGEDVR
MFDKSEWAKVISIVNQEPVLFSLSVAENIAYGLPNDLVSKDDIIKAAKAANAHEFIISLP
QGYDTLVGERGGLLSGGQRQRVAIARALLKNAPILILDEATSALDAVSERLVQSALNRLM
KDRTTLVIAHRLSTVQNAHQIAVCSDGKIIELGTHSELVAQKGSYASLVGTQRLAFE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttctgtaacctctcttctcttccaccacggctctactcgtctcatcgctcgt
tcacgatgccaatcacctctactcagaacgtgcggagtaacgccatttctctccttccgc
agctcgcgcggcggctccactgcgccgctcgggcttccgctgaaggcgaaatcggtggga
ttggctcgcgcttacgtcaccggagcgccgccgatcgtgggagaagaggatccgaagatc
gatggatcgaaatcggagcccgagaaggaggaatcgaaggatttgatcaagtgggggctt
gtgtggagcttgatgagcaagcacaagctcaggctcgttgtttgcttattgactctggtt
ggatgcagcacttgcactctctcgatgcctgtgttttctggtagattctttgaagtgttg
attggcgcgcggccggatcctctgtggcagctgctgagcaaaatcgctgttttgtattct
ttggaacccatctttactattgtttttgtaaccaacatgaatgctatctgggaaagcgtt
atggcaacgttacgagctcagattttcagaagggttttgatccagaaggcagagtttttc
gacaaatataaggtaggagagttgacggggctgcttacgtctgatcttggcgctctgaat
agcattgtgaatgataacatctcaagagaccgtggatttagggcattttctgaggttttt
ggaacaatctgcattttgttcaccctatctcctcaacttgcacctgtgcttggtctattg
atgctcgctgtatcagttttagttgctgtgtacaaaagatcgacggttcctgtttataaa
gcacatggattagcccaagcgacaatgtctgattgtgtatcagaaacgttctctgcaatt
cggactgtaagatcgttcagtggtgaaaaacgtcagatgtctctttttggtagtcagatt
cttgctttccagcgtagcggcttaaagcttggtactttcaaatctataaatgaatctata
acaagagttgctgtttatatttctttgttggctctatacgctcttgggggaagcaaggtc
aagacgggtgagcttgctgttggaacagttgtttccttcattggatacacttttactcta
acgtttgctgtccaagggctcgtaaacacgtttggagatctacgtggaagtttcgctgct
atcgagaggatcaattccattttaaatgcagtggacatagatgaggctcttgcctacggg
ctagaaagagatatacatacaaagaaagtccaagatgaaaaccttagattgttcttgtct
tctggtcctaacgtgaatatccgtcacctcgataagtactacatgtcagatctgaaatca
acgaacaatctacgtaccttgacttgggcaggagatgtctgtcttgacgatttgcatttt
gcttatcccctacgacccgatgtgaaagttcttgatgggttcagtttgacgttgagagct
gggaccgtaactgctcttgttggctctagtggtgcgggaaaaagtactattgtacagtta
ttggcacgcttctatgagccaacacaaggacgtattactgtggctggagaggatgtgagg
atgtttgacaagagtgaatgggctaaggttatctcaattgtgaatcaggaacccgttctc
ttttctctctctgtggccgagaatattgcatatggtctccctaatgatcttgtgtccaag
gacgacatcattaaggcagccaaagctgccaacgctcatgaattcataatctcacttccc
cagggatacgatacactggtgggtgaacgaggaggcttgcttagcggagggcagagacag
agagttgccatagcccgggctttgctgaagaacgcccccatcttgattctcgatgaggcc
acgagtgcgcttgatgcagtaagcgaacgtttggtccagagtgcgctgaaccgtctgatg
aaagacaggacaactttagtcatcgctcacagattgagcacagttcagaacgcgcatcag
atcgctgtatgctctgacgggaagatcatagagcttggaactcattctgagttggtggcc
caaaagggatcttatgcttcacttgttggcactcagaggctggcctttgagtag
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