Brassica napus (rape): 106426651
Help
Entry
106426651 CDS
T04128
Name
(RefSeq) bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
bna
Brassica napus (rape)
Pathway
bna00740
Riboflavin metabolism
bna00790
Folate biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01240
Biosynthesis of cofactors
Module
bna_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
106426651
00790 Folate biosynthesis
106426651
Enzymes [BR:
bna01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
106426651
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
106426651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
106426651
NCBI-ProteinID:
XP_013722822
LinkDB
All DBs
Position
C3:complement(39455522..39458451)
Genome browser
AA seq
531 aa
AA seq
DB search
MSSSINLSSSSPSTISLSRSRLSQTCTTPIHCVALPCNHQPSLSIKTTGKVKVKASVISR
EDDLLSYTNGNAPIQDPSQADSVSLGTLAPSDSSNAPPNGFVADDDDYELDLPTPGFSSI
PEAIQDIRQGKLVVVVDDEDRENEGDLVMAAQLATPEAMAFIVKHGTGIVCVSMKEDDLE
RLNLPLMVNHKENEEKLCTAFTVTVDAKHGTTTGVSARDRATTILSLASRDSKPEDFNRP
GHIFPLKYREGGVLKRAGHTEASVDLTVLAGLDPVGVLCEIVDDDGSMARLPKLRQFAAE
NCLKIVSIADLIRYRRKRDKLVERSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGEIG
DGQDILVRVHSECLTGDIFGSARCDCGNQLSLSMQQIESAGRGVLVYLRGHEGRGIGLGH
KLQAYNLQDAGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPAKYVGLKG
YGLAIVGRVPLLSLITKENKRYLETKRTKMGHMYGLKFNGDVVEKTETTES
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttccatcaatctatcgtcctcgtctccttccaccatctctctttcccgctcc
agattgagccaaacttgtactacaccgatccactgtgttgctttgccgtgtaaccatcaa
ccatcgttgtcaattaaaaccactggaaaagtcaaagtcaaagcttcagtgatctccaga
gaagacgatctcctctcttacaccaacggaaacgctcccatccaagatccgtcacaggcg
gattcagtttccctcggaacacttgctccttcagattcatctaacgcaccacccaatggc
ttcgtcgctgatgacgacgactacgagctggatttgcctacgcctggcttctcttccatc
cctgaggccattcaagacattcgccaaggaaagcttgtggtggttgtggatgatgaagat
agagaaaacgaaggcgatttagtcatggctgctcagctagctacacctgaagctatggct
tttatcgtcaaacatggaactgggattgtctgtgtgagtatgaaggaagatgatctcgag
aggttgaaccttcctcttatggtgaatcacaaggagaacgaagagaagctctgcaccgca
ttcacagtcactgtcgatgcaaagcatggtacaacgacaggagtatcagcacgtgacagg
gcgacaacgatactctcccttgcttcaagagactcaaagcctgaagatttcaaccgccca
gggcatatctttccgctcaagtaccgagaaggcggggttttgaaaagagctggacacact
gaagcatctgttgatctcactgttttagctggacttgatcctgttggagtactgtgtgag
atcgttgatgatgatggctccatggctagattaccaaagctccgtcagtttgcagccgag
aattgcctgaagattgtctccattgctgatttgatcagatatcgaaggaagagagataag
ctagtggaacgttcttctgcagctcggatcccaacaatgtggggacctttcacagcttat
tgctacaggtctatattagacgggatagagcacattgcaatggttaagggagagataggt
gatggtcaagacattctagtgagggtccattcagaatgtctcacgggagacatatttgga
tcagcaaggtgtgattgcgggaaccagctatcactttcgatgcagcagatcgagtctgct
ggtcgtggtgtgttggtttacttgcgtggacatgaaggaagagggattggtttaggacat
aagctccaagcttacaatctgcaagatgctggtcgtgacactgttgaagctaatgaggag
ttgggacttcctgttgattctagagagtatggaattggtgcacagatgctaagggacttg
ggagtgaggacgatgaagctgatgacgaataatccggcaaagtacgttggtctgaaggga
tatggattagccattgtgggaagagttcctctcttgagtcttattacaaaggaaaataag
agatatttggagacgaagagaactaagatgggtcacatgtatggcttgaagttcaatggt
gatgttgtggagaagactgaaaccacggagtcttga
DBGET
integrated database retrieval system
