Brassica napus (rape): 106426773
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Entry
106426773 CDS
T04128
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106426773
Spliceosome [BR:
bna03041
]
Common components
Common spliceosomal components
General mRNP proteins
106426773
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_10
RRM_7
Motif
Other DBs
NCBI-GeneID:
106426773
NCBI-ProteinID:
XP_013722957
UniProt:
A0A816J629
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Position
C9:61125304..61128951
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AA seq
538 aa
AA seq
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MRMEFDEYEYLEKTVEEGDGLDRKKEESERSYRKREGERRDVEEGDEERRSSRSKKSRGD
GEENGEGRRRDREKERHRSSRDKERERERDKIRVRGGSRDRESDRERSSKERDRGDRGKS
REREREKDRERRSKERERRSSSRSRREEKEREVVERGSRRNKDKKDEPEADPERDQRTVF
AYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAMSGH
MFLGQPVMVKPSEAEKNLAQSNTTTSVVGGTGPVDRKLYVGNLHYNMTELQLRQIFEQFG
PIELVQMPYDLVSGQCKGYGFIQFAQFEHSKAAQTALNGQLEIAGRTIKVSFVSEHIGTQ
DANPKSADFDDDDGNGLALNAQTRVQLMQKLDRTGVAANIVGPFGVPALNGTALNQPGMN
PGFPTSVLPTTAIPAFVTEPIGQPSQCLLLKNMFDPATETELDFDEEIKDDVGQECSKYG
QVNHIYVDKKSAGFVYLRFESVQAAAAAQRAMHMRWFAQKMISATFMPPNEYEAKAKA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggagtttgacgaatacgagtacctggagaagacggtagaggaaggagatgga
ttggataggaagaaggaagagagcgagaggagttacaggaagagggaaggagagaggcgt
gacgttgaagaaggtgacgaagagcgaaggagcagtcggagtaagaagtctcgtggagac
ggcgaagagaacggtgaaggtaggagaagggatcgggagaaagagaggcataggagcagc
cgagacaaggaaagagaaagagagagggataagattagggttaggggaggatcgagagat
agagagagcgatcgtgagaggagtagcaaagagagagataggggcgataggggcaaaagc
cgagagagagagagggagaaggatagagagaggagaagcaaagagagagagaggagaagc
agcagtagatcacggagggaagagaaggaacgcgaagtagttgaaagaggaagcaggaga
aacaaggacaagaaagatgagcctgaagctgatccagagagagaccaaagaactgttttt
gcatatcagatgcctcttaaagctaccgagagagatgtttatgagttcttctccaaagct
ggcaaggttagggacgtgaggctgattatggatagaaattcaagacgatcaaaaggagtc
gggtatattgagttttatgatgtgatgtctgttccaatggccatagctatgtctggacat
atgtttcttgggcaacctgtgatggttaagccctctgaagctgaaaagaatctggcgcaa
tccaataccactacaagcgttgtaggtggtactggccctgttgatcgaaagctctacgtg
gggaacttgcattacaacatgacagagttgcaacttagacagatttttgagcaatttggt
cctattgagcttgttcagatgccatatgaccttgtaagtggtcagtgcaaaggttatgga
ttcatccagtttgcccaatttgaacattcaaaggcagcacaaactgccttaaacggacaa
ttagagattgctggtagaacaatcaaggtttcgtttgtctctgagcatataggcacacaa
gacgctaatccaaaatccgctgattttgatgatgatgatggaaatgggctggctttaaat
gcacaaacgagggttcagcttatgcagaagctggatcgtacaggtgtcgcagcaaacatt
gtgggaccttttggagtaccagcgctaaatggaacagctctgaatcaaccaggcatgaat
cctggtttccccacatcagtgcttccgacaacagctatccctgcttttgtcacagagcct
attggtcaaccaagtcaatgccttctattgaaaaacatgtttgatcctgcaaccgagacg
gaattggattttgatgaagaaattaaagacgacgttggtcaagaatgctccaagtatggg
caggtcaaccatatttatgtagacaagaagagcgcaggttttgtgtatctgcggtttgaa
tcggtgcaggctgcagcggcagctcaaagagcaatgcacatgagatggtttgcacaaaag
atgatatctgcaactttcatgcctccaaatgaatatgaagccaaagctaaggcgtga
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