Brassica napus (rape): 106427147
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Entry
106427147 CDS
T04128
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106427147
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GFIT
Motif
Pfam:
Sel1
TPR_11
TPR_27
Motif
Other DBs
NCBI-GeneID:
106427147
NCBI-ProteinID:
XP_013723334
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Position
C5:9532476..9535628
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AA seq
678 aa
AA seq
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MRISGYGIVVLSVIVFYYLDRSVHARPVVLVLSNDDLNSGGDDPGVGDSSDFDEFGESEP
KSEEELDPGSWRRMFEPDDDSTVEAASPQYFSGLHKILSAASEGNDRLMEEAVDEIEAAS
SSGDPHSQSLMGFVYGTGMMREKSKSKSFLHHNFAAEGGNMQSKMTLAFTYLRQDMHDKA
VKLYAELAETAVNSFLISKDSPVVEPTRIHSGTEENKGALRKSRGEEDEDFQILEYQAQK
GNAAAMYKIGLFYYFGLRGLRRDHTKALHWFSKAVEKGEPRSMELLGEIYARGAGVERNY
TKALEWLTLAAKEGLYSAFNGIGYLYVKGYGVEKKNYTKAKEYFEKAVDNEDPSGHYNLG
VLYLKGIGVKRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYKLVA
ERGPWSSLSRWALEAYLKGDVGKALILYSRMAEMGYEVAQSNAAWILDKYGERSMCMGVS
GFCTDKESHERAHSLWWRASEQGNEHAALLIGDAYYYGRGTERDYVRAAEAYMHAKSQSN
AQAMFNLGYMHEHGQGLPFDLHLAKRYYDQALQSDAAAKLPVTLALASLWLRRNYADTFL
VRVVDSLPEVYPKVEAWIENVVFDEGNATILTLFVCLITILYLRERQRRQVVVPDPVGGD
VAQPLDAEVAQHLAAFPR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgagaatctcaggctacggaatcgttgttctctctgtaatcgtattctattacctcgat
cgtagcgttcacgcgcgtcccgttgtcctcgtcctctccaacgacgatctcaacagcggc
ggagacgatcccggagtaggagactcctccgacttcgacgaattcggcgaatccgaaccc
aagtccgaagaggagctcgatcctggttcgtggcgacggatgttcgagccggacgacgac
tcaaccgtcgaagccgcgtcgccgcagtacttctccggcctccacaagattctctcggcg
gcgagcgagggaaacgataggttgatggaggaagcggtggatgagatagaggcggcttct
tcgtccggagatccgcactcgcagtcgctgatgggattcgtgtacgggacagggatgatg
agggagaagagcaaaagcaaatccttccttcaccataacttcgcagctgaaggtgggaac
atgcagtcaaagatgacacttgccttcacgtatctgcgacaagatatgcatgataaagct
gtgaaactatacgctgaactagcagaaaccgctgtgaatagtttcctgatctcaaaggac
tctcccgtcgtggaaccaactagaattcacagcgggactgaagagaacaaaggcgctcta
aggaaatcacgaggggaggaggatgaggattttcagatattggagtatcaagcacaaaaa
ggcaatgctgcggctatgtacaagattggactgttctactactttggtctgcgagggtta
aggcgtgatcacaccaaggcgttgcactggttttcaaaggcggtggagaaaggagagccg
aggtctatggagcttttgggggagatatatgctcgaggagctggtgttgagagaaattat
accaaggcgcttgaatggcttacacttgcagcgaaagaaggtctatattcagcgtttaat
gggattggctacttgtatgttaaagggtatggagtagagaagaaaaactacactaaggca
aaggaatattttgaaaaggctgttgacaatgaagaccccagtgggcattataaccttggg
gttctgtatcttaaaggcatcggagtcaaaagggatgtgagacaggcaacaaaatacttc
tttgttgctgcaaatgctggtcagccaaaggctttctatcaacttgccaagatgttccat
actggagttgggcttaagaagaacctggaaatggcaacttcgttctataagttagtagca
gaaagaggaccatggagttctctctctagatgggcgcttgaagcttaccttaaaggagat
gtgggtaaggctttaatcttatactcgagaatggcagagatgggttatgaagtagcacaa
agtaatgctgcatggatcctcgacaaatacggtgaaagaagcatgtgcatgggagtatct
gggttttgcacggacaaagagagtcatgagagagcacattcgttgtggtggcgtgcatct
gaacaaggcaatgaacatgctgctctccttattggagatgcatattactatggccggggt
actgagagagattatgtgcgtgcggctgaggcatacatgcatgctaaatcacagtcaaac
gcgcaagcaatgttcaacctaggttacatgcatgagcatggacaagggcttccctttgac
ctgcatctagcaaaacgttactacgatcaagcacttcagagcgatgcagcagctaaattg
ccagtcacacttgctctcgccagcttatggctacgtagaaactatgctgataccttcctg
gtgagagttgtggattcattgccagaagtgtatccaaaggtagaggcttggattgagaat
gtggtgtttgacgaaggtaacgcgacaatcctcacactttttgtctgtcttattacgatt
ctctatctccgagagagacaacgaagacaagttgttgtccccgatcctgtgggaggcgat
gtggctcaacctctcgatgctgaggtggcacaacacctggctgcattcccacggtga
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