Brassica napus (rape): 106427200
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Entry
106427200 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: protein BREAST CANCER SUSCEPTIBILITY 2 homolog B
KO
K08775
breast cancer 2 susceptibility protein
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106427200
03460 Fanconi anemia pathway
106427200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106427200
03036 Chromosome and associated proteins [BR:
bna03036
]
106427200
03400 DNA repair and recombination proteins [BR:
bna03400
]
106427200
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
106427200
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
106427200
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
106427200
FA (Fanconi anemia) pathway
Downstream FA components
106427200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
106427200
NCBI-ProteinID:
XP_048623774
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All DBs
Position
A3:90103..95873
Genome browser
AA seq
1152 aa
AA seq
DB search
MSTWRLLPDSSGDCFRWEVAGRILQSDSEDYAIESTAPLPSMNDLLLQGWSNLKQGDEAI
LRTGLGNSVALKAKSILEDGHHHHHPDLHNIGGSSLQVDSAATLPMFRTASGRSVPLKDS
SIAKALSILGTHSDNVPLRESGFGDPNSFFQTASNKKVFVSSAGLSRANALLGLEADDFN
GFNHVKRSNSSHQKRGCSELKTHATGVQHHSEIPGQYECHVFEKIADNLYTSAVVPPTMF
QTAGGKTLSVSVQALKRARNLLGDPESGTLFDDVAAGDQFATPQKVQRLGDTAIKNRNAN
TGYNAYEGKTSNKHTATSFVSPLRSSSKQFRSAKLEDLASGGNLIKKFDAAVDETDCALN
TTKVATHGVSYNRPLASNMAVNNAKANGFIPIAKQFGQPLVDITNRSANNKQDSTQKKRL
GKTISVSPFKRPRNSSFKTPLKKNAQHALSGLSIVSSDTLNSKKVLSTRYPERSPRVYIK
DYFRMHPTVTTKMNYVPDHVRRIKSSNADKYVFRDESSSNMVGAETFFQILAESGASLQQ
ASRKWIINHYRWIVWKLACYETCYPLICRGNFLTITNVLEELKYRYEREVNHGHCSAIKK
ILSGDAPASSMMVLYISAIYPKTDNDSQEALGSGSGSNVKVELSDGWYSMNAALDVSLTK
QLNAGKLFVGQKLRILGAGLSGWATPTSPLEAVISNTICLLLNINGTYRAHWADRLGFCK
EVGVPLAFNCIKGNGGPVPKTLAGITRIYPILYKERLGERKSIIRSERMESRMTELHNQR
RSALVEGLMCEYERGVNGVHSQNDTDSEEGAKVFKLLETASEPELLMAEMSLEQLTSFTT
YKSKFEAAKQIQMEKSVAKALEEAGLSERDVTPVMRIRLVGLTSLSYEGEHNPKEGIVTI
WNPTERQRTELTEGKIYIVKGLVPTISDSETLYLHARGSSSRWEPLSPKASSSFQPFFNP
RKPISLSNFGGIPLSSEFDIAAYVVYVGNVYTDVEQKKQWVFVTDGSTQRSRSGEISNSL
LAISFSTPSMDDLPTPHISHSLVGSVVGFCNLIKRAKDAKNDMWVGEATENSVYSINAEA
AYSSHLKTSSSHIQTWAKLSSSNSVRSLLVPLSIFIYLSFFGSAIGFSARFWLVHKCFGI
FRLLGLLVFVLL
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggaggttattacccgattcaagcggcgattgtttccggtgggaagtcgca
ggccggattctccagtcggactcggaagattatgctattgaatccacagctcctctacct
tctatgaacgatctcttgctccaaggatggtcgaatcttaaacaaggggatgaagcgatt
ttgaggactgggctggggaactctgtagctctaaaagccaaatctattttagaagatgga
catcatcatcatcatccagatttgcacaacataggaggctctagtctccaagtggattca
gctgcaactttgcctatgttcaggaccgcctcaggacgttctgtcccattgaaagactcc
tccattgccaaagctctttctattcttggcactcactcagataacgttcctctcagggag
agtgggtttggtgatcccaactcttttttccagacagcatctaacaagaaggtttttgta
tcttctgccggtctgtcaagagccaacgcattgttaggactcgaagcagatgattttaat
ggatttaaccacgtgaagcggtccaattcttcccaccagaaacgtgggtgctctgagtta
aaaactcatgctacaggggttcagcatcattcagaaattccaggacaatacgagtgccat
gtatttgagaagatagcagataatttatatacatctgcagttgtaccgccaacaatgttt
cagactgctggtggaaaaacgttgtcagtatcagttcaggcattgaaacgtgccagaaac
cttctcggagaccctgagtcggggactctctttgatgatgtagcagcaggtgatcagttt
gctacaccacagaaagttcaaaggttaggtgatactgctataaaaaatagaaatgccaac
actggttataatgcttatgaaggaaagacaagcaacaagcatacggcaactagttttgta
tctcctcttcggtcatcttcaaagcagttcagatcagccaaattggaggatctagcttca
gggggtaatttgatcaagaaatttgacgcggctgttgatgaaacagactgtgctctgaat
actactaaagttgctacacatggagtatcatataacagacctttggcatcaaatatggca
gtgaataatgccaaggcaaacggcttcattccaatagctaaacaatttggccagccactt
gttgatataacaaatcgcagtgcaaacaataaacaagacagtacccaaaagaaaagactg
ggaaagacaatctccgtttctccttttaaaaggccaaggaattcctccttcaaaactcct
ttaaagaaaaatgctcagcatgctttaagtggtttgtctatcgtatcttctgatacactt
aattccaaaaaggtgctttctacaagatatccagaaaggtctccaagagtatatatcaag
gattattttcgaatgcatccaacagttacgactaagatgaactatgtgccagaccatgtc
agaagaatcaaatcaagtaatgcagataaatatgtattccgtgatgagtcttcctcgaat
atggttggagctgaaacttttttccaaattttggctgagtctggtgcttccctacaacaa
gcatctagaaagtggatcattaatcactacagatggatcgtctggaaacttgcatgctac
gagacgtgctacccactcatatgtagaggaaattttctgactatcaccaatgttctcgaa
gaactgaaatacagatatgagcgagaggtcaatcatggtcactgctctgcaatcaagaag
attctgagtggtgacgctccagcttcttcaatgatggtgctctacatatcagctatttat
ccaaagacggataatgattctcaggaagcacttggttctggtagtggcagcaatgtgaaa
gtagagctcagtgatgggtggtactctatgaatgctgccctggatgtcagcctgacaaag
cagctgaacgctggaaaattgtttgttggacagaagcttcgaatccttggggcaggactg
tctggctgggctacaccaacatcacctcttgaggcagtgatttcaaatacgatttgtttg
ctgttgaatattaatgggacgtacagagctcactgggcggaccgactaggattctgtaaa
gaagttggtgttcctctggccttcaactgtatcaagggcaatgggggtccagtgcctaaa
acgttagctggaatcacacgaatataccctatcctgtacaaggaaaggttaggtgaaagg
aagtcaattattcgatcagagagaatggaaagtagaatgactgagttgcataaccagagg
cgctcagctcttgttgagggtcttatgtgtgagtacgagagaggagtaaatggtgtccac
agccagaacgacactgacagtgaggaaggagcaaaggtctttaagctgttagagactgct
tctgaacctgaactcctaatggcagaaatgagtctggagcagttgacatctttcactaca
tataaatcaaaatttgaggcagccaaacaaatacagatggaaaaatcagtggcaaaagct
ctggaagaagctggcttaagtgaaagggatgtcaccccagtcatgaggattaggcttgtt
ggactgacgagtttaagttatgaaggagaacacaatccaaaagaaggcatagtaaccatc
tggaatccaacggagagacagagaaccgagttgacagaggggaaaatatacatagtgaaa
gggctagtaccgacgatatcagactcggaaacactttacttacatgccagagggtctagc
tcaagatgggagcctttgtctccaaaagcttcttcaagttttcagccctttttcaacccc
cgtaaacccatttctttgtcaaattttggtggaattcctctttcaagtgaatttgatatc
gctgcgtacgttgtatatgttggaaatgtatacacggatgttgagcaaaagaagcagtgg
gtgtttgtgacagatggatctactcaacgctcacgttcaggggaaatctcaaacagtctt
cttgctataagcttcagtaccccatccatggatgacttgcccactccccacatcagccat
agtcttgtcggatccgtggtaggattttgcaacctaataaaaagagcaaaggatgcgaaa
aacgatatgtgggttggagaggcaacagagaactcagtgtattccataaacgcagaagct
gcttactcctctcacctcaaaaccagcagttcccatatccaaacttgggcaaagctctct
tcttccaactcggttcgttctcttcttgtacctctatctatatttatttatctttctttt
tttggctcggcaattggtttttctgccaggttttggttggttcacaaatgttttggtatt
ttcagattacttggtttactggtttttgttttgctttaa
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