Brassica napus (rape): 106427315
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Entry
106427315 CDS
T04128
Name
(RefSeq) pyridoxal 5'-phosphate synthase subunit PDX1.3-like
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
bna
Brassica napus (rape)
Pathway
bna00750
Vitamin B6 metabolism
bna01100
Metabolic pathways
bna01240
Biosynthesis of cofactors
Module
bna_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
106427315
Enzymes [BR:
bna01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
106427315
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NanE
NMO
Motif
Other DBs
NCBI-GeneID:
106427315
NCBI-ProteinID:
XP_013723504
UniProt:
A0ABQ8DNP5
A0A078FDX8
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Position
A3:134678..136000
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AA seq
309 aa
AA seq
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MEGSSVVAVYGNGAITEAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA
LERVPADIRAQGGVARMSDPQMIKDIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDES
EVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV
RSVMGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM
MQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEMLVEVSCGLGEAMVGINLNDDK
VERFANRSE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaaggatcaagcgtcgtggcggtttacggtaacggtgcgataacggaggctaagaaa
tctcccttctccgttaaggtcggtctggctcagatgctccgcggcggcgttatcatggac
gtcgtcaacgccgagcaagcccgcatcgcggaggaagccggtgcttgcgccgtcatggct
ttggagcgcgttcccgccgatattcgcgctcagggaggcgtcgctcggatgagcgatccc
cagatgattaaggacatcaagcaggccgttacgattccggtgatggccaaggccaggatc
ggtcatttcgtggaggcgcagatcctcgaagcgatcggaatcgattacatcgacgagagc
gaggtgctgaccctcgccgacgaagacaaccacatcaacaagcataacttccggatccct
ttcgtctgcggctgccgcaacctcggcgaggctctgaggaggatccgcgaaggcgcggcg
atgatcaggacgaaaggtgaggctgggactgggaacatcgtggaggccgttaggcacgtg
aggtctgttatgggtgacatcagggttttaaggaacatggatgacgacgaggtcttcact
ttcgccaagaagcttgccgctccttacgatctcgtgatgcagaccaaacagcttggccgt
cttcccgtggttcagttcgccgcaggtggagtcgctactccggcggatgcggctctcatg
atgcagcttggatgcgacggtgtcttcgtgggttcaggtatcttcaagagcggtgaccca
gctcgtagggcgcgtgcgattgttcaggcggtgactcattacagtgacccggagatgctt
gtggaggtcagctgtgggcttggggaagcaatggttgggattaatctcaacgatgacaag
gttgagaggttcgctaaccgctctgagtga
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