Brassica napus (rape): 106427329
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Entry
106427329 CDS
T04128
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
bna
Brassica napus (rape)
Pathway
bna03030
DNA replication
bna03410
Base excision repair
bna03420
Nucleotide excision repair
bna03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106427329
03410 Base excision repair
106427329
03420 Nucleotide excision repair
106427329
03430 Mismatch repair
106427329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106427329
03400 DNA repair and recombination proteins [BR:
bna03400
]
106427329
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106427329
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106427329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_30
AAA_19
RCF1-5-like_lid
AAA_assoc_2
Rad17
nSTAND3
BRCT_2
AAA_18
RuvB_N
Zeta_toxin
AAA_14
Sigma54_activ_2
AAA_24
AAA_16
Gp44_lid
AAA_5
AAA_28
NTPase_1
TsaE
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
106427329
NCBI-ProteinID:
XP_013723510
LinkDB
All DBs
Position
C2:complement(4634699..4641570)
Genome browser
AA seq
970 aa
AA seq
DB search
MSDIRKWFMKAHEKGNGNAPKPTSSKAGAVVVDAKETAPIKSEQASEDLETAARKKTSKY
FAKDKAKAKEEKGVEELPAKRKLKTDSDDLGKPRPRKAIKVDDDDDDDFEVPSAKKTRDS
TPSKKLKTGSGRGVATKAVDNDEADDGEDAQEKDTPVKSGGRGRGGRAASGASTGGRGGG
GGGRGRGGFMNFGERKDPPHKGEKEVPEGSPDCLAGSTFVISGTLDSLEREEAEDLIKRH
GGRVTGSVSKKTTYLLCDEDIGGKKSEKAKELGTKFLTEDGLFDMIRSSKPVKKSLPEKT
NKSTEKVSALPKISPQKEETRGKPLAKSSPNKVPPPSSPAKGKKKIIQSSLPWTEKYRPK
VTNEIVGNQSSVTQLHNWLSHWHEQFGGSGSKGKGKKLTDAGAKKAVLLSGTPGIGKTTS
AKLVTQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANTVKELVNNEAIASNIDKSKHPK
TVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNYRKP
TKQQMAKRLAHVAKAEGLEVNDIALEELAERVNGDIRLALNQLQYMSLSMSVIKYDDIRQ
RLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDFDLVPLIVQENYVNYRPSSA
GKDEAKRMDLLARAAESIADGDIINVQIRRHRQWQLSLSSCVASSILPASLMHGSRDVLE
QGERNFNRFGGWLGKNSTAGKNTRLLEDLHVHVLASRESSSGRETLRVDYLPLLLNRLTS
PLQTLPKDEAVSEVVEFMNSYSISQEDYDTIMELAKFKGRANPLEGVAPAVKTALTKKYK
ETSKTRMVRAADMVQLPGLKKAPKKRIAAMLEPNVESLGGEDGVPLAENEEENESDAEDS
EEATNGEKLESNLKSLNARGIQVEVDLKGAGSSGGTRKAAGRGRGRGKAADASAAEKKAT
GRGAGAKRKR
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatattaggaagtggtttatgaaagcccacgagaagggcaatgggaatgctcca
aaaccgacgtcttcaaaggctggtgctgttgtggtggatgctaaggagactgcaccgata
aaatcagagcaggctagtgaagacctggaaactgctgctcggaaaaaaactagcaagtat
tttgctaaagataaagctaaagctaaagaggagaaaggggtggaagagcttcctgccaag
aggaaacttaagactgattccgatgatttaggcaagcctcgcccaagaaaggctatcaag
gttgatgatgacgatgatgatgattttgaggtgcctagtgcgaagaagactcgtgatagc
actcccagcaaaaaactaaagactgggtcaggtagaggtgtcgcaactaaagctgttgat
aatgacgaggctgatgatggcgaagacgcccaagaaaaggatactcctgttaaatcaggc
ggaagaggccgtggcggtagagctgcatcaggggcctcaactggtggaagaggaggtgga
ggtggaggtagagggagaggtgggtttatgaattttggtgaaaggaaagacccgcctcat
aaaggagaaaaggaagttcctgaaggcagccctgattgcttagctggatcgacatttgtt
attagtggaacacttgacagtttagaaagagaagaggcagaagatctgataaagcgtcat
ggtggtcgtgtcacaggctctgttagcaagaaaacgacttaccttttgtgtgatgaagac
atcggtggaaagaaatctgaaaaagctaaagagctgggcactaagttccttacagaagat
ggcctatttgacatgatccgttcctctaaacccgtaaaaaagtctctacctgaaaaaaca
aacaaaagcaccgagaaagtcagtgcactgccgaagataagtcctcagaaagaagagacg
agaggcaaacctttagcaaaaagttcgcccaacaaggtccccccaccatcttccccggca
aaggggaaaaagaaaattatccagtcttccttgccatggacggaaaagtacagaccgaag
gtcacaaatgagattgttgggaatcagtcatcggttactcagcttcacaactggctgtcc
cattggcatgagcaatttgggggtagtggaagtaaaggaaaggggaagaaattaactgat
gctggtgccaagaaggctgtacttttgagcggaacacctggtattggaaaaacaacatca
gcaaagttggttactcagatgcttggtttccaggcagttgaggttaatgctagtgacagt
cgaggaaaggcgaactcgaatattgccaaaggaattggtggtagcaacgcaaatactgta
aaagaacttgtcaataacgaagccatagcttctaacattgataagtcaaagcacccgaag
actgttctaatcatggatgaagtagatggaatgtctgcaggcgacagaggaggcgttgcc
gatctcattgctagcattaaaatatcaaaaattcctatcatttgcatttgtaatgaccga
tacagtcagaaattgaagagtttagtaaactactgtctgcccctcaattaccggaagccc
acgaagcagcagatggcgaaaaggctggcacatgttgctaaggcagaaggccttgaagtt
aatgatattgccctggaggaactcgctgagagagtgaatggtgacatacggttggccctg
aatcagctccaatatatgagcctgtccatgtcagtcatcaagtacgatgatatcaggcag
cgcctgctaagcagtgcgaaggatgaagatatttcacctttcacagctgttgacaagttg
tttggttataatggtgggaagctgagaatggatgaacggattgacctaagcatgagtgat
tttgatttggttccccttattgtacaggaaaactatgtcaattataggccaagttcagcc
ggcaaagatgaggcaaaacgaatggacttacttgcccgtgctgctgaatctattgcggat
ggagatattatcaacgtgcagattcggagacataggcaatggcaactctctctatcttcc
tgtgtcgcatcttctattctcccagcttcgttgatgcatggatcaagggacgtgctagag
cagggagaacgtaatttcaatagatttggtgggtggcttggcaagaattctacggcggga
aaaaatacgaggttgctggaagatctgcatgttcatgtccttgcttcccgtgaatccagc
tctggaagggagactcttcgcgttgattatctaccccttctcttgaaccgcttgacgagt
ccgctccagacactgcctaaggatgaagctgtttcagaagttgttgaattcatgaactcc
tactctataagccaggaggactatgatactattatggagttggcgaaatttaagggacgt
gcaaatccattagagggtgtcgcacctgcagtgaaaacagccttgactaaaaaatacaag
gagacgagtaaaaccagaatggtacgtgctgctgacatggtgcagcttccggggttgaaa
aaagcgccgaagaagcgaatcgctgcaatgcttgaaccaaatgttgaaagtttggggggt
gaagatggcgtgccgttagcagagaatgaagaagaaaacgaatcagacgctgaagactca
gaagaggcaactaatggagaaaagctggagtcaaatctaaaaagtttgaatgctagaggg
atccaagttgaagtggatttgaaaggagctggaagctcaggaggtacaaggaaggcagct
ggtagaggcaggggcagaggcaaagcagcagatgcttctgcggctgagaagaaggctaca
ggacgaggcgccggtgccaagagaaagagatga
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