Brassica napus (rape): 106427367
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Entry
106427367 CDS
T04128
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106427367
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106427367
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
106427367
Protein phosphatases and associated proteins [BR:
bna01009
]
HAD phosphatases
Fcp/Scp phosphatases
106427367
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106427367
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
NIF
dsrm
DUF7756
Motif
Other DBs
NCBI-GeneID:
106427367
NCBI-ProteinID:
XP_013723552
LinkDB
All DBs
Position
A3:155142..159371
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AA seq
760 aa
AA seq
DB search
MNRLGQKSVVYHGELRLGELDVKQVSSSSGNNEFRFPNDEIRIHHVSPAGERCPPLAILQ
TIASFSVRCKLESSAPVKPPELMRLHAVCFHELKTAVVLLGETEIHLVAMPSKEKKFPCF
WCFSLPLGLYDSCLRMLNTRCLSIVFDLDETLIVAHTMKSFEDRIEALKVWISREVDPVR
IHGMSAELKRFMDDRMLLKQYIDNDYAFDNGVLLKAQREEVRPTPDGLEKVYRPVIRLPE
KNTVLTRINPEIRDTSVLVKLRPAWEELRSYLTANTRKRFEVYVCTMAERDYALEMWRLL
DPEAHLIGLKELRDRIVCVKPDAKKSLLNVFKGGICHPKMAMVIDDRVKVWEDKDQPRVH
VVPAYLPYYAPQAETALPVPILCVARNVACNVRGYFFKEFDESLMSSISLVYHEDDVETL
PPSPDVSNYVIIEDPGFASNGNITAPPVIEGMCGGEVERRLNQASAADSSTPATSNAEQK
SETPKPQIAVIPNNASTTTAAALLPSHKPSLLGAPRRDGFTFSDGGRPLMMRPGVDIRNQ
NFNQPPLLSRIPMQPPSSSMHPQGGWLVDDENRAPFPGRPAGGYSNQLPHGIQGSAPVTN
PSHLRSEEICVDDDLKRQNASRQPTEGQSQLVSNGGEHHADSGKSNGGQSHLFVSALQEI
GRRCGSKVEFRTVMSTNRELQFSVEVLFTGEKIGIGMAKTKKEAHQQAAENALRSLAEKY
VAYVSPIAGETEKGSKNENGFLWENNEAIGNEGLEEEEAT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtttaggtcagaagtcggtggtctaccacggagagttgcgtctgggggagctt
gatgtgaagcaggtctcttcctcctccggcaacaacgaatttcgcttccctaacgacgag
attcgaatccaccacgtttctcctgccggcgagaggtgtcctccgctcgccattctccag
actatcgcttctttctccgttcgttgcaagcttgagtcctccgctccggtcaaacctccc
gagttgatgcgtcttcacgccgtctgtttccatgaattgaagactgcggtggtattgctg
ggagaaacggagattcatttggtggcgatgccgagcaaggagaagaagttcccttgtttc
tggtgtttctcactccctttaggtctttatgattcctgtttaaggatgctcaacactcga
tgtctctctattgtctttgatcttgatgagactctcattgttgcccataccatgaagtcc
tttgaggatcgcatcgaagctctcaaggtttggatctcccgggaggttgatcctgtcagg
attcatggaatgtccgctgagcttaaaaggtttatggatgataggatgctcctcaagcag
tatattgataatgactatgcttttgataacggtgttttgctcaaggctcagcgtgaggag
gtccgccctactcctgacggcctcgagaaagtttatagacctgtcattagattgcctgaa
aagaataccgttcttactcgtatcaatcctgagatccgtgacactagtgtgcttgtaaaa
cttagaccagcgtgggaggagttaaggagctatttgacagcaaacactaggaaacgcttt
gaagtttatgtttgtaccatggctgaaagggactatgctttggaaatgtggagattactc
gatccggaagcgcacctgataggcctcaaggagcttcgagatcgtattgtatgcgttaaa
ccagatgccaagaaatcgttgttaaatgtcttcaaaggtggcatatgccaccctaaaatg
gcaatggttattgatgatcgtgttaaggtttgggaggacaaggatcaaccacgggttcat
gttgttcctgcatatcttccatattatgctccacaggcagagacagcccttcccgttcca
attctttgcgtagcaagaaatgttgcatgcaatgtcagaggttactttttcaaggaattt
gacgagagtttaatgagtagtatatctttggtttaccatgaagatgatgtggaaacttta
cccccttcaccggatgtgagcaactatgtcattatagaggatcctggctttgcctcaaat
ggaaacataactgctcctccagttatcgaaggaatgtgtgggggtgaagtggaacgcaga
ctaaaccaagcgtctgcagctgattcttctactcctgcaacgagtaacgctgagcagaaa
tctgaaacccccaagccgcagatagcagttataccaaataacgctagcacaacaactgca
gcagcattgttaccttctcataaacctagtttgcttggagctcctagacgagatggcttc
actttttctgatggtggaagacctcttatgatgaggcctggtgttgatataagaaaccag
aacttcaatcagcctcctcttctgtctcggattcctatgcaaccaccttcgtcttctatg
catcctcagggtggttggttggtagatgacgagaacagagctccttttcctggtcgacct
gcaggaggttattcaaatcagcttcctcatggtatacaaggttctgctcctgtcacaaac
ccatcccacttgaggagcgaagagatatgtgtggatgatgacctcaaaaggcaaaatgct
tcacgtcaaccgacagaagggcagagtcaactggtgtcaaatggtggagaacatcatgca
gatagtggaaagagtaatggtgggcagtctcacttatttgtgagtgcactgcaggaaatt
ggaagaagatgcggttcaaaggtggagtttaggactgtgatgagtaccaacagagagtta
cagttttcagttgaggttttgttcacgggggagaagattggcattgggatggcaaaaact
aaaaaggaagcacatcaacaagcggctgagaatgctcttcggagcttggctgaaaaatat
gttgcttatgtctcacctattgctggagaaacagagaaaggttccaaaaatgaaaatggg
tttttgtgggaaaacaatgaagctatagggaacgaagggcttgaagaagaagaagccacc
tga
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