Brassica napus (rape): 106427430
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Entry
106427430 CDS
T04128
Name
(RefSeq) RNA-binding protein Y14
KO
K12876
RNA-binding protein 8A
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
bna03015
mRNA surveillance pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106427430
09122 Translation
03013 Nucleocytoplasmic transport
106427430
03015 mRNA surveillance pathway
106427430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106427430
03041 Spliceosome [BR:
bna03041
]
106427430
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106427430
Spliceosome [BR:
bna03041
]
Complex C
Other components
EJC/TREX
106427430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
106427430
NCBI-ProteinID:
XP_013723611
UniProt:
A0A078IU14
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All DBs
Position
C3:complement(71442990..71444519)
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AA seq
200 aa
AA seq
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MANIEAEAVDFEPEEDDLMDEDVGASDLSPRAGHPRLRSAIAGANDESANRKTKGRGFRE
EKDSDRQRGLSSRDFESLGSDGGPGPQRSIEGWIVLVTGVHEEAQEDDISNAFGDFGEIK
SLHLNLDRRTGFVKGYALIEYEKSEEAQSAIKAMNGAELLTKNVSVDWAFSNGPNNAGSY
RRRNMRSGRSQRSRSPRRRF
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacatagaagctgaagcagtcgatttcgagccagaggaggacgacctcatggac
gaagacgtcggagcatctgatctctccccacgcgctggtcatccgaggcttaggtcagca
atcgccggagcaaacgacgaatcagcgaataggaagaccaaaggccgcggatttcgcgag
gagaaagattccgatcgccagcgcggcctctcctcccgcgacttcgaatctctcggttcc
gatggcggtcccggcccccagcgatccattgaggggtggattgttttggtcactggagtt
catgaggaggcacaggaggatgatatctccaatgcttttggtgattttggcgagattaag
agtctgcatctcaatctcgatcgccgtactggttttgtcaagggctatgctttgattgaa
tacgagaagagtgaagaagcacagagtgctatcaaagcaatgaatggtgctgagcttctg
accaagaatgtcagcgttgactgggcctttagcaatggaccaaacaatgctggatcttac
aggagaaggaacatgaggtcggggaggtcacaacggtcacgaagcccgagaagacgtttc
tga
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