Brassica napus (rape): 106427942
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Entry
106427942 CDS
T04128
Name
(RefSeq) cell division control protein 48 homolog A
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106427942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106427942
03009 Ribosome biogenesis [BR:
bna03009
]
106427942
04131 Membrane trafficking [BR:
bna04131
]
106427942
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106427942
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106427942
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
106427942
Membrane trafficking [BR:
bna04131
]
SNARE
SNARE associated proteins
Others
106427942
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106427942
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106427942
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_2
AAA_16
AAA_5
AAA_14
AAA_22
AAA_33
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
Parvo_NS1
AAA_18
nSTAND_NTPase5
Vps4_C
ABC_tran
Viral_helicase1
NB-ARC
AAA_7
AAA_lid_PRS2_C
TsaE
IstB_IS21
DUF815
NACHT
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
106427942
NCBI-ProteinID:
XP_013724119
LinkDB
All DBs
AA seq
810 aa
AA seq
DB search
MSNPAESSDSKSKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGDT
ILIKGKKRKDTICIALADDSCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGQRVHI
LPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVV
APDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTE
AALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWD
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGGGGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNI
FKACLRKSPVAKDVDINALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSEN
PEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFET
NAAGSGATTGVADPFATSAAAAADDDDLYN
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacccagctgaatcttcagactcgaaatcgaagaaagacttcagtactgctatt
ctggagaggaagaagtctccgaacagactcgtcgtcgacgaggccatcaacgatgataac
tccgtcgtgtctctccaccctgccaccatggagaagctccagctcttccgtggcgatacc
attctcatcaagggtaagaaaaggaaggatactatttgcattgctcttgctgatgattca
tgtgaggagccaaagatcaggatgaacaaagtggttagatctaacttgagggttaggctt
ggtgatgtcatctctgttcaccagtgccctgatgtcaagtacggacagcgtgtgcacatc
ttgcctgttgatgataccgttgaaggagtcactggaaacctctttgatgcttacctcaaa
ccttatttcttggaggcgtatcgcccagtgaggaagggagatctcttcctagtgagagga
ggaatgaggagtgtggagttcaaggttattgagacagatcctgctgagtactgtgtggtg
gctccggacactgagattttctgtgagggtgagccagttaagagagaggacgaagagagg
ctagatgaagtgggttatgatgacgttggtggtgtcaggaagcagatggctcagatcagg
gagcttgttgagcttcccttgaggcacccacagctgttcaagtcgattggtgttaagcca
ccgaaggggattctgctttacggaccacctgggtctggaaagactctgattgctcgtgct
gtggctaacgaaactggtgcctttttcttctgtatcaatggtcctgagatcatgtctaag
cttgctggtgagagtgagagcaatctcaggaaagcgtttgaggaggctgagaagaacgct
ccttcgattatatttattgatgagattgactccattgcacctaaaagagagaagactaat
ggagaggttgagaggaggattgtgtctcagctccttacgcttatggatgggcttaagtct
cgtgctcacgttattgtcatgggagcaaccaatcgccccaacagtattgatccagctttg
agaaggtttggaagatttgatagggagattgatattggtgttcctgacgagattggacgt
cttgaagttctcaggatccacacaaagaacatgaagcttgctgaagatgtggaccttgag
aggatctcaaaggacacacacggctatgttggtgctgatcttgcagctctgtgcacagaa
gctgccctgcagtgcatcagggagaagatggatgtgattgatttggaagatgactccata
gatgctgaaatcctcaactccatggcagtgaccaatgagcacttccacactgctctcggc
aacagcaacccatctgctcttcgtgaaactgttgtggaggttcctaatgtttcttgggat
gacattggaggtcttgagaatgtcaagagagagctccaggagactgtccaatacccagtg
gagcacccagagaagtttgagaagttcggtatgtctccatcaaagggagtcctcttctac
ggtcctcctggatgtggtaaaacgctattagccaaagctatagccaacgagtgccaagca
aacttcatcagtgtcaaaggtcctgagcttctcaccatgtggtttggtgagagtgaagcc
aacgtccgtgaaatctttgacaaggcacgtcagtctgctccctgtgtgctcttctttgac
gagctagactccattgccactcagagaggaggtggaggcggaggtgatgcaggtggcgca
gcggacagagtcctcaaccagcttttgaccgagatggatggaatgaacgccaagaagact
gtcttcatcatcggagcaaccaacagacccgacattattgattctgctcttctccgtcca
ggaaggctcgaccagctcatttacattccgctcccagacgaggattcacgtctcaacatc
ttcaaggcctgcttgaggaaatcacctgttgctaaagatgttgacatcaacgctctggct
aagtacacgcaggggttcagtggtgctgatatcactgagatttgccagagggcttgcaag
tacgccatcagagaaaacatcgagaaggacattgaaaaggagaagaggaggagcgagaac
cctgaggcgatggaggaagatggagtggatgaagtgtctgagatcaaagctgcacatttt
gaggagtcgatgaagtatgcgcgcaggagtgtgagtgatgcagacatcaggaagtaccaa
gcgtttgctcagacgctgcagcagtctagagggtttggttctgagttcaggttcgagact
aatgctgctggttcaggtgcaaccactggagtcgccgatccttttgccacctcggcagct
gctgctgcggacgatgatgatctctacaattag
DBGET
integrated database retrieval system
