Brassica napus (rape): 106427949
Help
Entry
106427949 CDS
T04128
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106427949
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106427949
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
90S particles
Helicases
106427949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
UTP25_NTPase-like
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
106427949
NCBI-ProteinID:
XP_013724126
LinkDB
All DBs
Position
C1:49230079..49233078
Genome browser
AA seq
545 aa
AA seq
DB search
MEKSANFLFGGTNFNRKKFAPDFAKFKNRTVEDDDRNKKLSFFEQEEESEEEPEQEKIAS
SSSSSKKRKRKSANSEPVEGFDVFKSSKKSRSKGKEVEHDTKDETLENPKKELYRRMEQD
ALSRKQYNIHVSGNNIPSPLKSFTELASRYGCKKYILRNLAELGFKEPTPIQRQAIPILL
SGRECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTAREGKKLIKG
SKFNIRLMTKPLVKTADFSKLQCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFE
QSMLKQIDGVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQ
KLVFAGTEEGKLLALRQSFAQSLNPPVLIFMQSKERAKQLYDELKCEDIRVGVIHSDLPP
GERENAVDSFRAGETWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGR
SGEAITFYTEEDVPFLRNIANTMTSSGCEVPSWIMTLKKKKWKKHRPKRDSISTRPKDSK
IEQEE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaagcgcgaattttctgttcggtggaacaaacttcaatcggaaaaagttcgct
ccagatttcgccaagttcaagaatcgcacggtggaggatgatgatcgcaacaagaaactg
agcttctttgagcaagaagaagaatcagaggaggagcctgagcaagagaagatagcttcc
tcctcctcctcctctaagaagaggaaacgaaaatctgctaattctgagcctgttgaaggg
tttgatgtgttcaagagctcgaagaagtcgcggtctaaagggaaagaggttgagcacgac
acaaaggatgagactttggagaatcccaagaaggagctttacaggcggatggagcaagat
gctttgtcgaggaaacagtacaacattcatgtctctggtaacaacattccatccccgctt
aaaagcttcacagagttggcatcgaggtatggttgtaagaaatacatattacgcaattta
gctgaactaggatttaaagagcctacacctatccagaggcaggctattccaattctcttg
tcgggtcgtgagtgctttgcctgtgctccaactgggtcaggaaaaacctttgcttttatt
tgccccatgcttataaaactcaagcgccattcaacagatggtattagagcagtcatcctc
tctcctgcacgagaactagccgcccaaacagctagagaagggaaaaaacttatcaaagga
agcaagttcaacatcaggttaatgactaaacccctcgtcaaaaccgctgatttctcgaag
ctgcagtgtgatgttctcatatcaacacccatgcggcttaaacgagccatcaaggctaaa
aaaatcgacttaagcaaggtggagtatcttgtccttgatgaatctgacaagctgtttgag
cagagcatgttgaaacaaatagatggtgtggttaaggcttgttcaaacccttcgatcata
cggtcattgttcagtgctactttgccagattccgttgaggagctcgcacgttccataatg
cacgatgctgttcgtgtgatcattggccgaaagaacacagcatctgaaaccgtcaagcaa
aagctggtttttgctggaactgaagaagggaagcttctcgctcttcgccaaagctttgca
cagagtctgaatccaccggtactaatctttatgcaaagcaaagaacgagcaaagcaactc
tacgatgaactgaaatgtgaagacatcagagtcggtgtcatccattccgatctccctcct
ggagagcgagaaaacgcggttgatagcttcagagcaggcgagacatgggttctgatagcc
actgatgtgatcgctagaggtatggatttcaaagggatcaactgcgtgatcaactatgac
ttcccggattctgcttctgcgtacatccacaggattggtcgatcagggagagcgggaaga
agcggtgaagcgataacgttctacacggaagaagatgtgcctttcttaaggaacatagcc
aacaccatgacatcatcgggatgtgaggttccgtcgtggatcatgactttgaagaagaag
aagtggaagaagcataggccaaagcgtgattctatatccactcgacccaaagacagtaaa
atcgaacaagaagagtaa
DBGET
integrated database retrieval system
