Brassica napus (rape): 106428085
Help
Entry
106428085 CDS
T04128
Name
(RefSeq) structural maintenance of chromosomes protein 6B
KO
K22804
structural maintenance of chromosomes protein 6
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106428085
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
106428085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
SMC_hinge
SbcC_Walker_B
AAA_21
AAA_15
YwqH-like
ABC_tran
Rrn6_HB
Fez1
Motif
Other DBs
NCBI-GeneID:
106428085
NCBI-ProteinID:
XP_013724282
LinkDB
All DBs
Position
C7:complement(45186789..45193590)
Genome browser
AA seq
1057 aa
AA seq
DB search
MAKSGARPSASFIKQRSGSGTILRIKLENFMCHSNLQIEFGEWVNFITGQNGSGKSAILT
ALCVAFGCRAKGTQRASTLKDFIKTGCSYAVVHVEIKNQGEDAFKPEVYGDVIIVERRIT
ESASSTILKDHEGKKVSSRKDELRELVEHYNIDVENPCVVMSQDKSREFLHSGNDKDKFK
FFFKATLLQQVNDLLQSIYEHLNSATAIVDEMEETIKPIEKEINELRGKIKNMEQVEEIA
QKLQQLKKKLAWSWVYDVDRQLQEQTDKIVKLKERIPTCQAKIDWELGKVESLRDRLTKK
KAKVACLMDESTAMKREIETCHQSAKTAAREKIALEEEFNHKRNGVQKIRDRVRRLERQV
GDINEQTMRNTQAEQSETEEKLRYLEQEIEKAETLLSRLKEEENSLLEKASVGRREMEHI
EDMIRDHQKRQNNINSNIYDLKKHQTNKVTAFGGDRVIYLLQAIERHHRRFKKPPIGPIG
SHVTLINGNKWAPAVEQALGNMLNAFIVTDHKDSLTLRSCANEANYKNLKIIIYDFSRPR
LNIPRHMIPQTEHPTILSVLHSDNPTVLNVLVDVSNVERQVLAENYEVGKAVAFGQRLSN
LKDVFTLDGYRMFFRGPVQTTLPPIPRKPTRLCASFDDQIKDLEIEASRGKSEINQCMRR
KRGAEENLEELESKIRTLKKHRSQAEKVLTTKEFEMRDLKSTVAAENEASSSSSVNELQL
EIMKEREEMEEKEAFLEKLQMCLKEAELKANKLNASFENLRESAKGEIDAFEEAENELKK
IEKDLQSAEAEKIHYENIMKNKVLPDINEAEANYEELKTKRKESDQKASEICPESEILSL
GPWDGSTPEQLSAQINRMDQRLHRENQQFSESIDDLRMMYEKLERKIAKKRKLYQGYREK
LMACKTALDSRWGKFQRNASLLRRQLTWQFNSHLGKKGISGHIKVSYENKTLSIEVKMPQ
DATSNAVRDTKGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDALV
DFAIAHGAQWMFITPHDISMVKSHERIKKQQMAAPRS
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatccggggctcgacccagcgcttccttcatcaaacagcgttccgggtcgggt
acgatcctaaggattaagctcgagaatttcatgtgccatagtaatctccagatcgagttt
ggcgagtgggtcaatttcatcaccggccaaaacggaagtggaaagagtgcgatattgact
gctctatgtgttgcattcgggtgtagagcgaaagggactcaacgcgcttccactttgaag
gatttcattaaaactggatgcagctatgcggttgtccatgttgaaattaaaaaccaagga
gaagatgcttttaagcctgaagtatatggtgacgttataattgtcgaacgtaggataacc
gagtctgctagctctaccattctcaaggatcatgaagggaaaaaagtaagtagccgaaag
gatgagctacgggaacttgttgaacattataacattgatgttgagaatccttgcgtagta
atgagtcaagacaagagcagggagtttctgcattctggaaatgacaaagataaatttaag
ttcttttttaaggcaacccttcttcagcaagttaatgatcttctccaaagtatctacgag
cacttgaattctgcaactgccatagtcgatgaaatggaggaaacaatcaaaccaatagag
aaggagatcaatgagttgcgtggaaagataaagaacatggaacaagttgaagaaatagct
caaaagttacagcagttgaaaaagaaacttgcttggtcttgggtgtatgatgtggatagg
cagctccaggaacagaccgataagattgtgaagcttaaagaacgcatacctacttgccaa
gctaaaatagactgggaactaggtaaagtggaatcgttaagggatcgcttgaccaagaag
aaagctaaagttgcatgtctgatggatgaatcaactgcgatgaagagagagatagagact
tgtcaccaatcggccaagacggcggcacgagaaaagattgctctagaagaagaattcaat
cataagcgcaatggtgttcagaagattagggatcgtgttagaaggcttgaacggcaggtt
ggagatatcaatgaacagacaatgagaaacactcaggctgaacaatctgaaacggaggag
aaactgagatacttggaacaggagattgagaaggctgaaacactactttccagattgaaa
gaggaagagaattccttactggaaaaagcgtcagttggaaggagagagatggaacacatc
gaggatatgattcgagaccatcaaaagagacaaaataatataaactccaacatttatgat
ctaaagaaacatcaaacaaacaaggttactgcgtttggaggggacagagtcatttatctt
ctgcaggctattgagagacatcatcgtagattcaaaaagcctccaattggtcctattggc
tcccatgtgacgttgatcaatggcaataaatgggcgcctgcagttgaacaagctcttgga
aacatgttaaatgcattcattgtgactgatcataaagattctctcactttaagaagctgt
gctaatgaagccaattataaaaaccttaagattattatatatgacttttcgagaccaagg
ttaaatataccgaggcacatgattcctcagacagaacatccaacaattctctctgttttg
cattccgataatccaaccgttcttaatgtcttggtggatgtgagtaatgttgagaggcaa
gtgcttgcagagaactatgaggtgggaaaggcagttgcttttgggcaaaggctctcaaat
ctgaaggatgttttcactttagacggatacagaatgttttttcgtgggccagttcagaca
actcttcctcctattcctcgtaaacctacgcgactatgtgcttcttttgatgaccagatc
aaggatcttgaaatagaggcttctcgaggaaaaagcgagataaatcaatgcatgagacgt
aagaggggagcagaggagaatctcgaagaacttgagtcgaaaatccgcacactgaagaag
caccgaagccaagcagagaaagttttgacgacaaaggaattcgagatgcgagatttgaag
agcacagtcgctgcggagaatgaagcatcatcgtcttcaagtgttaatgagcttcaactt
gaaatcatgaaagaacgagaagagatggaggagaaagaagctttccttgagaagctccag
atgtgcttgaaagaagctgaactaaaagctaataaacttaatgcttcatttgagaactta
cgtgagtcagccaagggtgaaattgatgcctttgaggaagcagagaacgagctaaagaag
attgagaaagatcttcagtctgccgaagcggagaaaatccattacgagaatataatgaaa
aacaaggtcctacctgatatcaatgaggctgaggctaattatgaggagcttaaaactaag
cgaaaggaaagcgaccagaaggcctctgaaatttgtcctgagagtgagatattgtctttg
ggtccctgggatgggagtactcctgagcagctcagtgctcagattaacagaatggatcag
agacttcatcgagagaaccagcagttttctgaatcaatcgatgatcttaggatgatgtac
gagaaactagaacgaaagattgcaaagaagcgcaaattgtaccaaggctatcgagaaaaa
ctcatggcctgtaaaactgctctggattcgcggtggggcaagtttcaaaggaatgcatct
ttgcttcggcgccagctaacgtggcaattcaattctcacttgggaaagaaaggtatcagt
ggacacatcaaagtcagttatgaaaataaaactttgtccatagaggttaagatgccgcaa
gatgcaacaagtaatgccgttcgagacaccaaaggtctttcaggaggagaacgttctttc
tcaactttgtgctttgcattagctcttcacgagatgacagaagccccatttcgagcaatg
gatgagtttgatgtgtttatggatgctgtaagccggaaaatcagtttggacgctctggtg
gattttgcaattgcacatggagcgcagtggatgttcatcactcctcatgatatcagcatg
gtgaagtcgcatgagaggataaagaagcagcaaatggccgctcctcgttcttga
DBGET
integrated database retrieval system
