KEGG   Brassica napus (rape): 106428135
Entry
106428135         CDS       T04128                                 
Name
(RefSeq) sm-like protein LSM5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
bna  Brassica napus (rape)
Pathway
bna03018  RNA degradation
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106428135
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106428135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106428135
   03041 Spliceosome [BR:bna03041]
    106428135
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106428135
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     106428135
Spliceosome [BR:bna03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    106428135
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 106428135
NCBI-ProteinID: XP_013724335
UniProt: A0A078H7W2 A0ABQ8EE60
LinkDB
Position
C9:2698088..2698984
AA seq 89 aa
MASNNPSQLLPSELIDRCIGSKIRVIMKGDKELVGVLKGFDVYVNMVLEDVTEYEITAEG
SRVTKLDQILLNGNNIAILVPGGAPEDVE
NT seq 270 nt   +upstreamnt  +downstreamnt
atggcgagcaacaatccgtcgcagcttcttccatcagagctaatagacaggtgcataggg
tcgaagataagggtgataatgaaaggagacaaggagctcgttggggttctcaaaggcttc
gacgtttacgtcaacatggtccttgaggatgtcaccgagtatgagatcacagcagaagga
agccgtgtaacgaagcttgatcagattctactcaatggcaacaacatcgccattttggtg
ccaggtggagctccagaagacgtagaatga

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