Brassica napus (rape): 106428160
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Entry
106428160 CDS
T04128
Name
(RefSeq) ABC transporter A family member 1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
bna
Brassica napus (rape)
Pathway
bna02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106428160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106428160
Transporters [BR:
bna02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
106428160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
ACT_13
R1_ABCA1
AAA_29
Motif
Other DBs
NCBI-GeneID:
106428160
NCBI-ProteinID:
XP_013724364
LinkDB
All DBs
AA seq
1875 aa
AA seq
DB search
MGTWRRQLKAMLRKNWLLKTRHPFVTSAEILLPTVVMLLLIAVRTRVDTTIHPARSNIEK
DTVVQVGEGISPSFPQVLELLLADGEFLAFAPDTDETNNMIDILSLKFPDLRLVTRIFKD
DIELETYITSAHYAVCSDVRNCSNPKLKGAVVFHEQGPHVYDYSIRLNHTWALAGFPNVK
SIMDTNGPYINDLEMGINTIPTMQYSFSGFLTLQQVVDSFIIFASQQNIDLPSSHASLGS
ALSLEMPWTMFSPSKIRMVPFPTREYTDDEFQSIVKSVMGLLYLLGFLFPISRLISYSVF
EKEQKIREGLYMMGLKDEIFHLSWFITYALQFALCAGIITTCTMGSIFKYSDKTLVFTYF
FLFGVSAIMLSFLISTFFTRAKTAVAVGTLAFLGAFFPYYTVNDESVSMVLKVVASLLSP
TAFALGSINFADYERAHVGLRWSNIWLASSGVSFFVCLLMMLLDSILYCAIGLYLDKVLP
RENGVRYPWNFIFNKCFGRKKNNQYCIPGLNSNIEGTQGEPFDPVIESISLEMRQQELDG
RCIQIKNLHKVFASGRGNCCAVNSLRLTLYENQILSLLGHNGAGKSTTISMLVGLLPPTS
GDALILGNSIVTNMDEIRKELGVCPQHDILFPELTVREHLEMFAVLKGVKEDSLKSTVTD
MAEEVGLSDKISTLVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLI
KKIKKGRIILLTTHSMDEAEELGDRIGIMANGSLKCCGSSMFLKHHYGVGYTLTLVKTSP
AVSVAAHIVHRHIPSATCVSEVGNEISFKLPLASLPCFENMFREIESCMKSSVDRSRISE
IEDSDYPGIQSYGISVTTLEEVFLRVAGCNLDIEDKQDTFASPDTEASLVCIESVQKSTI
QPKLLASCNEGAGVIITSIAKACRLIVAAVWAFIGFISMQCCGCSVISRSMFWRHCKALF
IKRARSAFRDRKTVAFQLIIPAVFLLFGLLLLQLKPHPDQKSITLTTAYFNPLLSGNGGG
GPIPFDLSEPIAKEVAEYIEGGWIQPLRNSSYKFPNPKEALADAIDAAGPTLGPTLLSMS
EFLMSSFDQSYESRYGAVLMDSQHPDGSVGYTVLHNSTCQHAGPIYINVMHSALLRLASG
NKNMTIQTRNHPLPPTKSQRLQRHDLDAFSAAIIVSIAFSFIPASFAVPIVKEREVKAKH
QQLISGVSVLSYWLSTYVWDFVSFLFPSTFAIILFYAFGLEQFIGIGRFLPTVLMLLEYG
LAIASSTYCLTFFFTEHSMAQNVILMVHFFSGLILMVISFVMGLIPATVNANSYLKTFFR
LSPGFCFSDGLASLALLRQGMKDKSSHGVFDWNVTGASISYLALESIFYFLLTLGLELLP
VQKMMSFSIGEWWQNFKVFKQGAGSSSTEPLLKDSSGAISADMEDDIDVQEERNRVISGL
TDNTIFYLQNLRKVYPGSNHHGPKVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGE
ETPTSGTAFVFGKDIVASPKAIRQHIGYCPQFDALFEYLTVKEHLELYARIKGVVDYIID
NVVMEKLVEFDLLKHSHKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRF
MWDVISRLSTRSGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLE
LEVKPNEVSHVDLENLCQMIQQWLFNVPSQPRSLLGDLEVCIGVSDSITPDTASASEISL
SPEMIQSIAKYLGNEQRVSTLVPPMPEEDVGFDEQLSEQLFRDGGIPLPIFAEWWLTKEK
FSALDSFIQSSFPGATFKSCNGLIIKYQLPFGEGGLSLADAFGHLERNRNRLGIAEYSIS
QSTLETIFNHFAANS
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgggaacatggaggaggcagctaaaggctatgctccgcaagaattggcttctcaaaact
cgtcatcccttcgttacttctgctgagattttgcttccgactgttgtaatgttgctgttg
attgccgtgaggacacgcgttgacaccacaattcaccccgctcgctcgaatatagagaaa
gacacggtggtccaagtcggcgaaggtatctctcccagttttcctcaagttttggagctt
ttgcttgctgatggggagttcttagcttttgcacctgacaccgatgaaacaaataacatg
atcgacattctctctctaaagtttcctgatctgcggctggttactagaatttttaaagat
gacattgagctggaaacctatataacctctgcgcattatgctgtctgcagcgatgttagg
aattgttcgaatccaaaactaaaaggagcagtggttttccatgaacaaggacctcatgta
tatgattatagcatccgcttgaaccacacatgggcattggcaggattccctaatgttaag
tcgatcatggacacaaatggaccttatatcaatgatctggaaatggggattaataccata
ccaacaatgcaatacagcttcagcggattcttgactcttcagcaggtggtagactctttc
attatatttgcctctcagcaaaacatagacttgccatcatcacatgcatctcttggttca
gcgttatcccttgagatgccatggactatgtttagcccgtcaaagataagaatggttcca
tttccaacccgcgaatacactgatgatgagttccaatctattgtcaaaagcgtaatgggc
ttgttgtaccttctgggatttctgtttccaatctcccggcttatcagctactctgtcttt
gagaaggagcagaaaataagagaaggactttacatgatgggcttgaaagatgagattttc
catttgtcgtggtttatcacatatgcattgcagttcgcattgtgcgctgggattattaca
acttgtacgatgggaagtatctttaagtatagtgataagacattagtcttcacatacttc
tttctgtttggggtcagcgcaataatgctctcatttctaatatcaacatttttcactcga
gctaagacagctgtcgcagttgggaccttggcctttctcggagcattcttcccttattac
actgttaacgatgaatctgtgtccatggtattgaaagttgttgcttctttgctttcacct
actgcatttgctcttgggtcaatcaactttgctgattacgagcgtgcacacgttggactt
cgttggagcaacatatggctggcatcgtctggagtaagtttttttgtctgcctcttgatg
atgctgctcgactctattctgtactgcgctattggcctttatctggacaaggtccttccc
agggaaaatggtgtacggtacccatggaactttatcttcaacaagtgctttgggaggaag
aaaaacaaccaatattgcattccaggtctcaactctaatatagagggtactcagggagag
ccttttgatcctgttatcgaatcaataagcctggaaatgaggcaacaagagcttgatggg
aggtgcatacaaattaaaaatctgcataaggtctttgcttcaggaagggggaattgctgt
gcagttaattcattgcgactaacattgtacgagaaccagatactttcacttctgggccat
aatggggctggtaaaagcacaacaatatcaatgcttgtcggccttcttcctccaacttct
ggagatgccctgatacttggaaacagtatcgtcacaaatatggatgagatacgaaaagaa
ctaggtgtttgccctcagcatgacatcctctttccggaactgacagttagagaacacttg
gagatgtttgcggttcttaaaggtgttaaggaagattccttgaagagcacagttactgat
atggcagaggaagtggggttgtctgataaaattagtacactagtgcgggcactttccgga
ggcatgaaaaggaaattatcacttggaatcgcattgataggaaacagtaaggtgattatt
ctcgatgaaccaaccagtggaatggatccctactcaatgcgtcttacatggcagttgatt
aagaaaattaaaaagggcagaataatattgctaacaacccattccatggatgaagctgaa
gaacttggagatcggatagggatcatggctaacgggtctcttaagtgttgtggcagctcg
atgttcctgaagcatcactacggggttgggtacactctgacgctagtaaagacttctcca
gctgtctctgttgccgcacatatagttcatcgtcacattccatcagcaacctgtgtgagt
gaggtgggaaacgaaatctctttcaagcttcctttggcatccttgccttgctttgaaaat
atgttcagagaaattgagagttgcatgaagagttctgttgacagatctaggattagtgag
attgaggattcagattatcctggtattcagagttatggtatatctgtgacaacacttgaa
gaggtgtttctgagagttgctggctgtaacttagatatcgaggacaagcaagatacattt
gcttctcctgataccgaggcttctttggtgtgcattgagtctgttcagaagagcactatc
caacccaaattactagcaagttgtaatgagggcgctggagttattattacctcaattgca
aaagcttgcagattaatcgttgctgcagtttgggctttcattggattcattagcatgcaa
tgttgtggttgttccgttatctcaaggtcaatgttttggcggcattgcaaagcgttgttc
ataaaaagagcaagatctgctttccgagatcgcaaaacagtggcgttccagctcatcatc
ccagcagtattcttactttttggccttcttttactacagctcaagccacatcctgatcag
aaatccattacgctgacaactgcctattttaatcctctcctgagtggcaatggaggtggt
ggtccgattccttttgatctatctgagccaattgccaaagaggttgcagaatatattgaa
ggaggctggattcagcccttgaggaatagttcatataagtttcctaatccaaaagaggca
ttggctgatgcaattgatgcagcaggtcccacgttgggccccactctactttccatgagc
gaatttctgatgtctagttttgatcagtcatacgagtcaaggtatggggcagttttaatg
gatagtcagcatccagatgggagtgtaggatataccgtgttacacaacagtacttgccag
catgctggtcctatctacatcaatgttatgcattctgcccttctccgacttgctagtggt
aacaagaatatgacaattcaaactcgaaaccatcctttgcctccaacaaaaagtcagcgc
ttacagcgtcatgatttggatgccttttcagctgcaattattgtaagcattgcattttca
ttcatcccggcctcctttgcagttcccattgttaaggagcgagaggtgaaagcgaagcac
caacagcttattagtggggtttctgttctttcatactggttatcaacgtacgtatgggat
ttcgtcagtttcttatttccgtcaacatttgcaataatcctcttctacgcttttggtctg
gagcagtttatcggaataggtcggtttctaccgactgtcctgatgctcctggagtatggc
ttggcaattgcatcatcaacttattgtcttacatttttcttcaccgagcatagcatggct
cagaatgttattcttatggttcacttcttctctggtcttatcttaatggttatctcattt
gtcatgggccttattccagctacagttaatgcaaactcatatctaaagaccttctttaga
ctatcaccaggattttgcttctctgatggattggcttctttagctcttctaaggcagggg
atgaaagacaaatccagtcatggggtgtttgattggaatgtcactggagcatctatctca
tacctagctttggagagtatattctacttccttttgacgcttgggcttgagctcttgcct
gttcaaaagatgatgtctttctcaattggggagtggtggcagaattttaaagttttcaag
caaggtgctggttctagttctacagagccgcttctcaaggattcgagtggagccatttcc
gctgatatggaggatgacatagacgtgcaagaggaaagaaacagggtgatttcagggttg
acagacaacaccatattctacttacagaacctgagaaaggtctatcctggttccaatcat
cacggcccaaaagtagctgtacagtctttgactttctcggtccaagcaggagaatgtttt
ggctttttagggacgaatggagctgggaagactactaccttgtctatgctatctggagaa
gaaacaccaaccagtggaactgcctttgtctttggcaaagacatagtagcgagtcccaaa
gctatccgtcagcatattggctactgcccccagtttgatgctttattcgagtatttgact
gtgaaggagcaccttgaactttatgcaaggatcaaaggagtggttgactatataattgat
aatgtggttatggaaaagctagtcgagtttgacttgttgaagcattctcacaagccatca
ttcactcttagcggcggaaacaagcgcaaactatccgttgctattgcgatgattggagat
cctcccattgtcatccttgatgaaccatctacaggtatggatcctgttgccaaaagattc
atgtgggatgtgatatctcgcctgtcgacaaggagtggaaagacggcggttattcttact
actcacagcatgaatgaagctcaagcgctttgcacaaggatcgggatcatggttggaggc
cgcctgagatgcataggtagtccacaacacttaaagacgcgcttcggaaaccaccttgag
ttagaggtcaaaccaaacgaagtgagccatgtggacttggagaacctttgccagatgatt
cagcagtggctgtttaacgttccttctcagcctagaagtttgcttggtgacctcgaagta
tgtatcggagtctctgactctattactcctgatacggcttcagcatcagaaatcagtttg
tcaccagaaatgatacaaagcattgccaagtatctgggtaatgagcagagagtgagtact
cttgtacctcccatgcctgaggaagatgttggattcgatgaacagttatcagaacagctc
tttcgagatggtggtattccgttgccaatatttgccgagtggtggcttaccaaagaaaag
ttttcagcattagattctttcatacaatcttcgtttccaggtgcaacgtttaagagctgc
aatggattgatcattaaataccagttgccatttggagaaggaggattgtcacttgcagat
gcctttggacaccttgaaagaaacaggaatcggttgggaatagctgaatacagcataagt
cagtccacacttgagaccatattcaaccattttgcagctaactcataa
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integrated database retrieval system
