Brassica napus (rape): 106428225
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Entry
106428225 CDS
T04128
Name
(RefSeq) protein TRANSPARENT TESTA 12
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106428225
Transporters [BR:
bna02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
106428225
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
106428225
NCBI-ProteinID:
NP_001302766
UniProt:
A0ABQ7Z1V1
B8R351
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Position
C6:28265266..28268305
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AA seq
507 aa
AA seq
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MSSTETYEPLLRRLHSDSQITERSSPEIEEFLGRGRSTVTPRWWLRLFVWESKLLWKLSG
ASIVVSVLNYMLSFVTVMFTGHLGSLELAGASIATVGIQGLAYGIMLGMASAVQTVCGQA
YGARQYSSMGIICQRAMVLHLAAAVLLTFLYWYSGPILKAMGQTVAIAHEGQVFARGMIP
QIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFS
WWLLAAVNGLYIVMSPSCRETWTGFSARALTGIWPYLKLTVASAVMLCLEIWYNQGLVII
SGLLTNPTISLDAISICMYYLNWDMQFMLGLSAAISVRVSNELGAGNPRVAKLSVVVVNI
TTVLISLFLCVVVLVFRVGLSKAFTSDKEVIVAVSDLFPLLAVSIFLNGIQPILSGVAIG
SGWQAVVAYVNLVTYYVIGLPIGCVLGFKTSLGVAGIWWGMIAGVILQTITLIVLTLRTN
WTSEVENAAHRLKASANESQEMATEGV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagctccacggagacatacgagccgttattgagacggctccactcagattcgcagatc
accgaacgttcttcaccggagatagaagagtttctcggccgtggtagatccacggtgacg
ccacggtggtggctaaggctgtttgtgtgggagtcaaagcttctatggaagctctctgga
gcctctattgtcgtctctgtgctgaactacatgctcagcttcgtcaccgtaatgttcacc
ggccatcttggttctcttgagctcgctggcgcttccatcgctaccgtcggcatccaaggc
ctcgcttacggtatcatgttgggaatggcgagcgcggttcagacagtgtgtggtcaagcg
tacggcgcgagacagtattcatcaatgggaataatctgccaacgagccatggtcttgcac
ctcgcagctgcagtcctcctcacgttcctctactggtactctggtcccattctaaaggca
atgggccaaaccgtagccatcgcacacgagggtcaggtctttgcacgtgggatgattcct
cagatatacgccttcgctctcgcttgccctatgcagaggttcctccaggctcagaacata
gtaaaccctttggcttacatgtctttaggagttttcttgctccacacgttactcacgtgg
cttgtaaccaacgtgttggattttggcttgctgggtgcggctttgattctaagtttctcg
tggtggctgctcgctgctgtgaacggtttgtatatcgtgatgagcccgagttgtagggag
acatggaccgggttttcagctagggctcttacagggatttggccttacttgaagctcacg
gtagcttcagcagtcatgctatgtttggagatatggtacaaccaagggctagtgatcatc
tccggtttactcaccaatcccacaatttccttagatgcaatttcgatttgcatgtattac
ttgaactgggatatgcagttcatgcttggtttaagtgcagcaatcagtgtccgtgtgagc
aacgagctaggagctggaaatccacgagtggctaagttatcagtggtggtggtgaacatc
acgacggttctcatcagcttgttcctctgtgtcgtggtgctcgtgttccgtgtcggccta
agcaaagccttcaccagcgacaaagaagttatagtggcagtctctgacctatttcctcta
ctcgcagtttccatttttttaaatggaatccaacctattctctctggggttgctattgga
agtggatggcaagcagtggtggcttatgtgaatcttgttacttactatgtcattggtctt
cctattggctgtgttcttggcttcaaaacaagtcttggagttgctgggatctggtgggga
atgattgcaggagtcatacttcaaaccataactttgattgttcttacacttagaactaac
tggacttccgaggtggaaaatgcagctcataggttgaaagcttcggcaaatgagagtcaa
gagatggctaccgaaggagtctaa
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