Brassica napus (rape): 106428251
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Entry
106428251 CDS
T04128
Name
(RefSeq) citrate synthase 2, peroxisomal isoform X1
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna00020
Citrate cycle (TCA cycle)
bna00630
Glyoxylate and dicarboxylate metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01200
Carbon metabolism
bna01210
2-Oxocarboxylic acid metabolism
bna01230
Biosynthesis of amino acids
Module
bna_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bna_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
bna_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
106428251
00630 Glyoxylate and dicarboxylate metabolism
106428251
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
106428251
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
Motif
Other DBs
NCBI-GeneID:
106428251
NCBI-ProteinID:
XP_013724456
UniProt:
A0A816QB83
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Position
C6:complement(28174104..28177149)
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AA seq
507 aa
AA seq
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MEISARRLAVITAHLAVPDPVGSIQVLPPAIEPWCTSSALPPHGSLKGSLTIVDERTGKR
YQVPVSEDGTVKAVDLKKITTGKDDKGLKLYDPGYLNTAPVRSSISYIDGDEGILRYRGY
PIEELAESSTFIEVSYLLMYGNLPSQSQLADWEFTISQHSAVPQGVLEIIQSMPHDAHPM
GVLVSAMSALSIFHPDANPALRGQDIYKSKQVRDKQIVRILGKAPTIAAAAYLRMAGRPP
VLPSGNLSYAENFLYMLDSMGNTSYKPNPRLARVLDILFILHAEHEMNCSTAAARHLASS
GVDVYTAVAGAVGALYGPLHGGANEAVLKMLAEIGSVENIPEFIEGVKNRKRKMSGFGHR
VYKNYDPRAKVIKKLADEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGL
IYRAMGFPPEFFTVLFAVPRMAGYLSHWRESLDDPDTKIMRPQQAYTGVWLRHYEPVRER
TLSSDSDKLGQVSISNASRRRLSGSAL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggagatttctgcgagaagattggccgttatcactgcgcacttggcggtacctgatccc
gtcggatcgatccaggtgttgccgccggcgatcgagccatggtgcacatcgagtgcttta
ccaccgcatggatcgctcaagggaagcttaacgatcgttgatgagcgcacggggaagaga
tatcaggtcccagtttcagaggatggtaccgttaaagccgttgatctcaagaagattacg
acggggaaggatgacaaggggcttaagttgtacgatccaggttacttgaacacggctcct
gttcggtcttcgatctcttacatcgatggagatgaagggatcctacgttatcgtgggtac
ccaatagaagagttggctgagagcagcactttcattgaggtttcttatctcctcatgtat
gggaatctgccttctcaaagtcagctagctgattgggagttcaccatttctcaacattct
gctgtcccacaaggagtattggaaatcatacagtccatgccgcatgatgcgcacccaatg
ggcgttcttgtgagtgcaatgagcgcactttccatctttcatcctgatgccaaccctgct
cttaggggccaagatatttacaagtcaaaacaagttcgtgataaacagattgttcgtatt
cttggaaaggctccaacaattgcagcggctgcttatttgaggatggcaggcaggcctcct
gttcttccttctgggaacctttcttatgctgagaatttcctctatatgctggattcaatg
ggcaatacgtcttacaagcctaatcctcgtctagctcgagtgctagacatcctcttcata
ttgcatgctgaacatgaaatgaactgctccactgctgctgctcggcatcttgcctctagt
ggtgttgatgtgtacaccgctgttgcgggagctgttggagccctatacggtcctcttcat
ggcggtgcgaacgaggctgtccttaagatgttagcagagattggcagtgttgaaaacatt
ccagagttcatcgaaggggtgaagaacagaaagaggaagatgtctggttttggacatcgt
gtttacaaaaactacgacccgagagcaaaagtcattaagaaactggcggatgaagtgttc
tccatcgttggaagggatcctctgatcgaggtagcagttgctctagagaaggcggcactc
tctgatgaatattttgtgaagagaaagctttatccaaatgtggatttctactctggatta
atctatagggcaatgggattcccaccagaattcttcacagtcctgtttgcagtcccgcgt
atggctggatatttgtcacactggcgggagtctttagatgatcctgacactaagatcatg
agaccccaacaggcctacactggggtgtggctaaggcattacgagccggtgagagaaaga
acgttgtcaagtgattcggataagttgggtcaagtttcgatttcgaatgcatcaagaagg
cgtttatctggctctgcactttag
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