Brassica napus (rape): 106428262
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Entry
106428262 CDS
T04128
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106428262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106428262
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106428262
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
OB_RNB
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
106428262
NCBI-ProteinID:
XP_013724465
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All DBs
Position
C1:14805817..14808458
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AA seq
431 aa
AA seq
DB search
MEQKMESVSDLGKLFIGGISWDTDEERLGEYFSKFGDLVESVIMRDRATGRARGFGFIVF
ADPSVAERVIMEKHIIDGRTVEAKKAVPRDDQQQVLKRHASPMHLGGNGGRTKKIFVGGL
PSSITEAEFKNYFDQFGTVSDVVVMYDHNTQRPRGFGFVTFDSEESVDIVLHKTFHELNG
KMVEVKRAVPKEPSQASVNRSSPVLGFGNNYGVVSNNSYFNSFAPGYSNNPGGRFSPIGS
GRNAFSNFGLGSNQELSLNGNTLGFNRLPGDQYFNNASPNRFNSPIGFNRGDSAYNPSNR
DLWGNSPGLNLGVSVGNNRGNWGLSDTNGYGRSFGTGSGLSALSFSGNNNNTNGFDGSIG
ELYRGSSVYSDSTWQQTLPYHQSSIELEGLSRSYGFGIGNVGSDPSGNASEGYPGSYSVG
GNRQTNRGIEA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaagatggaatctgtatcggatctggggaagctcttcattggcggcatctca
tgggacacagatgaagaacggctcggagagtattttagcaagtttggagatttagtcgaa
tccgtgatcatgagagaccgtgccacaggacgtgcacgtggctttggtttcatcgtattc
gcagatccttctgttgcagagagagtcatcatggagaaacacatcatcgatggccgcacg
gtcgaggcgaagaaagctgttccacgggatgatcagcagcaagtgctgaaacggcacgct
agtccaatgcaccttggtggtaatggtgggagaacaaagaagatctttgtaggtggttta
ccatcgagcatcaccgaggctgagttcaagaactactttgatcagtttggtacagtttct
gatgttgtggtgatgtatgatcacaacacacagaggccacgaggctttggcttcgtcact
tttgattccgaagagtctgtggatatagttcttcacaagaccttccacgagcttaacggc
aaaatggttgaggttaaaagagcagtgccaaaggagccttcccaagcttctgttaaccga
agcagcccggttcttgggttcggtaataactatggagtagtctctaataatagctacttc
aatagttttgctcctggttatagtaacaaccctggtggacggtttagtcccattggtagc
ggtagaaatgctttctctaactttggtcttggctcgaatcaagaactgagtttgaatgga
aacacacttgggtttaaccggctccctggcgaccaatacttcaacaatgcttcaccaaac
cggttcaactctccaattggattcaacagaggcgactctgcttacaaccccagcaataga
gacttgtggggaaacagtccaggcttgaacttaggtgtctctgttggtaacaacagagga
aactggggcctttctgatactaatggctatgggagaagctttgggacaggttctggactt
tctgcgttatcattctctggtaacaacaacaacacgaacggttttgatggctctataggg
gagttgtacagaggcagctcggtttatagcgactcaacgtggcagcagacgttgccttac
catcagtcttctattgagttagagggcttgtctcgctcttatgggtttggtattggcaat
gtaggctcagacccatctggtaatgcctctgaaggttaccctggaagctacagtgttgga
ggaaatagacaaacaaatagaggtattgaagcatag
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