Brassica napus (rape): 106428291
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Entry
106428291 CDS
T04128
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106428291
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
106428291
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106428291
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
106428291
NCBI-ProteinID:
XP_013724486
UniProt:
A0A816RFG6
LinkDB
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Position
C1:14763862..14767777
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AA seq
637 aa
AA seq
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MPALTRNKKKGAKSQTPPLIKRTKSNPTPPPKKAAKSHKPPLKKQRKGILDEKPEVYNDE
EEEEEEEVSEHSDEGDELGSDLFSDGDGEEEEEEEDTEPLGDDFLDGSDDEEETLGSDSD
SDLEKESKAIDEERERQERDAKDELQMNIKEQPDEFRLPTKKELEEEASGPPDLPALQTR
IKEIVRVLSNFKDLRPEGVKRKEFVEQLKADLASYYGYNEFLIGTLVEMFPPVELMELIE
AFEKQRPTSIRTNTLKTRRRDLADVLLNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYL
AGCYMLQSASSFLPVMALAPRENERVVDMAAAPGGKTTYVASLMKNTGIIYANEMKVPRL
KSLTANLHRMGVTNTIVCNYDGRELPKVFGPNSVDRVLLDAPCSGTGVISKDESVKTSKS
ANDIRKFADLQKQLILAAIDLVDAESKTGGYIVYSTCSIMIPENEAVIDYALKKRDVKLV
PCGLDFGQAGFSRFREHRFHPTLEKTRRFYPHVHNMDGFFVAKLKKMSNETKASEGDEPV
KTKEQAQLSSDEDDDDESIKELKKPSGANVDMNKQRISISKANNKGKKNKNFKTENANVE
GPRKQKKKRSQWKAEIAQAREDKRKVMRENTKEPGRR
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctcttacgcgtaacaagaagaagggagctaagtcgcagactcctccactgatt
aagcggactaaatcgaatcccacgcctccaccgaagaaggcggcgaaatcccataagcct
ccgttgaagaaacagaggaaaggtatattggatgagaagcctgaagtttataatgatgag
gaggaagaggaagaagaagaagtgagtgaacattctgatgaaggagatgaattgggttct
gacttgttctcagatggtgatggagaagaagaagaagaagaagaagatacagaaccgttg
ggcgacgactttctcgatggtagcgatgatgaggaggaaactttgggttctgattctgac
tctgatctcgagaaggaaagtaaagctattgatgaagaacgtgaaaggcaggagcgagat
gcgaaagatgaattgcagatgaacattaaggaacaacctgatgagtttcggctaccaacg
aaaaaggaacttgaagaagaggcaagtgggccaccagatcttcctgccttgcaaactagg
atcaaagagattgttagagtgctgtcgaattttaaggatttaaggccagaaggagtcaag
aggaaggagtttgttgaacagcttaaggctgatcttgcttcttattacggctataatgag
tttcttattggaactcttgttgagatgtttcctcctgttgaactcatggaactaatcgaa
gcttttgaaaagcaaaggcctacttctatacgtaccaacactcttaagactcggagacgg
gatctggctgatgtacttttgaacagaggagttaatctagacccattaagcaagtggtca
aaagttggacttgtcgtttatgattcacaagttccaattggtgcaactcctgaatatttg
gctggttgctatatgttgcaaagtgctagttccttcttgccagtgatggctcttgctcct
cgagagaatgagcgcgttgtggacatggctgctgcccctggtggtaaaacaacttatgtt
gcttccctaatgaagaatactggcataatatatgcaaacgagatgaaagtacctaggctt
aagtcactcactgccaatctgcatcgcatgggggtgacaaataccatagtttgtaactat
gatggaagagagctacccaaggtttttggtccgaactcggtagatagagtattgttggat
gctccttgcagtggaactggagttatatcaaaagatgaatcagttaaaacttccaaaagt
gccaatgacataaggaaatttgctgatttgcaaaagcaacttatacttgctgctattgat
ttggtggacgccgaatccaaaaccggtggatatattgtttactcaacatgctccattatg
attcccgagaacgaagctgtgatcgattatgccttaaaaaagagggatgtcaaactcgtt
ccatgtggacttgattttgggcaagcaggatttagtagatttagagaacaccggttccac
cctactttggagaaaactagacgcttctatccccacgtccacaacatggacggattcttt
gtggcaaagctgaagaagatgagcaatgaaacgaaggcttcagaaggtgatgagccggtt
aaaacaaaagagcaagctcagttgtctagtgatgaagatgacgatgatgagtccattaag
gagttgaagaaaccttctggagccaatgtagacatgaacaaacaaagaatttcaatctca
aaggcgaacaacaaaggcaaaaagaacaaaaacttcaaaaccgaaaatgctaatgtggaa
ggacccaggaagcaaaagaagaagagatcacaatggaaggctgaaattgcacaagctagg
gaagataaaagaaaagtcatgagagagaatactaaggagcctgggagaagatag
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